Detailed information NTG0905365

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SGQ81_RS10180
• Genome accession: NZ_CP138866
• Coordinates: 2062843..2063313 (-)
• Length: 156 a.a.
• NCBI ID: WP_000610650.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 160
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2057843..2068313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGQ81_RS10125 (SGQ81_10125)	-	2058312..2058611 (-)	300	WP_000988332.1	HNH endonuclease	-
SGQ81_RS10130 (SGQ81_10130)	-	2058843..2059259 (-)	417	WP_000590122.1	hypothetical protein	-
SGQ81_RS10135 (SGQ81_10135)	-	2059287..2059487 (-)	201	WP_000265042.1	DUF1514 family protein	-
SGQ81_RS10140 (SGQ81_10140)	-	2059607..2059861 (-)	255	WP_000370292.1	DUF1024 family protein	-
SGQ81_RS10145 (SGQ81_10145)	-	2059854..2060138 (-)	285	WP_001105620.1	hypothetical protein	-
SGQ81_RS10150 (SGQ81_10150)	-	2060135..2060584 (-)	450	WP_000982708.1	YopX family protein	-
SGQ81_RS10155 (SGQ81_10155)	-	2060649..2060897 (-)	249	WP_001126836.1	phi PVL orf 51-like protein	-
SGQ81_RS10160 (SGQ81_10160)	-	2060898..2061269 (-)	372	WP_000101268.1	SA1788 family PVL leukocidin-associated protein	-
SGQ81_RS10165 (SGQ81_10165)	-	2061282..2061686 (-)	405	WP_000401976.1	RusA family crossover junction endodeoxyribonuclease	-
SGQ81_RS10170 (SGQ81_10170)	-	2061695..2061913 (-)	219	WP_000338530.1	hypothetical protein	-
SGQ81_RS10175 (SGQ81_10175)	-	2061920..2062813 (-)	894	WP_000148326.1	DnaD domain-containing protein	-
SGQ81_RS10180 (SGQ81_10180)	ssbA	2062843..2063313 (-)	471	WP_000610650.1	single-stranded DNA-binding protein	Machinery gene
SGQ81_RS10185 (SGQ81_10185)	-	2063314..2063931 (-)	618	WP_073394849.1	MBL fold metallo-hydrolase	-
SGQ81_RS10190 (SGQ81_10190)	-	2064012..2064932 (-)	921	WP_000138475.1	recombinase RecT	-
SGQ81_RS10195 (SGQ81_10195)	-	2064934..2066877 (-)	1944	WP_000700560.1	AAA family ATPase	-
SGQ81_RS10200 (SGQ81_10200)	-	2066886..2067149 (-)	264	WP_353059209.1	hypothetical protein	-
SGQ81_RS10205 (SGQ81_10205)	-	2067158..2067418 (-)	261	WP_000291488.1	DUF1108 family protein	-
SGQ81_RS10210 (SGQ81_10210)	-	2067511..2067672 (-)	162	WP_000066020.1	DUF1270 domain-containing protein	-
SGQ81_RS10215 (SGQ81_10215)	-	2067669..2067989 (-)	321	WP_001120197.1	DUF771 domain-containing protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17658.50 Da
• Isoelectric Point: 4.9628

>NTDB_id=905365 SGQ81_RS10180 WP_000610650.1 2062843..2063313(-) (ssbA) [Staphylococcus aureus strain 160]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=905365 SGQ81_RS10180 WP_000610650.1 2062843..2063313(-) (ssbA) [Staphylococcus aureus strain 160]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAATCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACGATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	51.765	100	0.564
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Vibrio cholerae strain A1552	31.492	100	0.365
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365