Detailed information NTG0902747

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: SE700_RS05510
• Genome accession: NZ_CP138427
• Coordinates: 977864..979384 (+)
• Length: 506 a.a.
• NCBI ID: WP_000058966.1
• Uniprot ID: A0A061KPU8
• Organism: Escherichia coli strain 21EVA
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 972864..984384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE700_RS05485	ilvE	974418..975347 (-)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-
SE700_RS05490	ilvM	975367..975630 (-)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
SE700_RS05495	ilvG	975627..977273 (-)	1647	WP_001012620.1	acetolactate synthase 2 catalytic subunit	-
SE700_RS05500	ilvX	977276..977326 (-)	51	WP_001387183.1	peptide IlvX	-
SE700_RS05505	ilvL	977413..977511 (-)	99	WP_001311244.1	ilv operon leader peptide	-
SE700_RS05510	comM	977864..979384 (+)	1521	WP_000058966.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
SE700_RS05515	maoP	979409..979747 (-)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
SE700_RS05520	hdfR	979866..980705 (+)	840	WP_000379245.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55213.40 Da
• Isoelectric Point: 7.4105

>NTDB_id=902747 SE700_RS05510 WP_000058966.1 977864..979384(+) (comM) [Escherichia coli strain 21EVA]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVVGQEHGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=902747 SE700_RS05510 WP_000058966.1 977864..979384(+) (comM) [Escherichia coli strain 21EVA]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCAATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTGAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTTGCTCCAGCCGATCTACCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAACATGGAAAGCGAGGACTGGAAATTACCGCCGCTGGCGGGCACAACCTTT
TACTGATTGGGCCTCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTGTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGTGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCTCATCACAGTGCATCGTTAACTGCGATGGTAGGCGGTGGCGCAATTCCAGGGCCCGGTGAAATTTCGCTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGTTACCTGAATTTGAAAGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACGCGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTCGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACACCAGAGCAAACGCTGCGTTATCTCAACCGACTCTCTGGTC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCGCCTCCCGGTATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAACGCCTG
GCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCGATGTGGCTGGAAGAAACGCTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAACATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATA
A

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

3D structure

• AlphaFold DB: A0A061KPU8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.904	100	0.595
comM	Glaesserella parasuis strain SC1401	58.777	100	0.589
comM	Vibrio cholerae strain A1552	59.163	99.209	0.587
comM	Vibrio campbellii strain DS40M4	57.968	99.209	0.575
comM	Legionella pneumophila str. Paris	48.394	98.419	0.476
comM	Legionella pneumophila strain ERS1305867	48.394	98.419	0.476
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443