Detailed information NTG0902520

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: SE336_RS19360
• Genome accession: NZ_CP138376
• Coordinates: 4529733..4531253 (+)
• Length: 506 a.a.
• NCBI ID: WP_104623836.1
• Uniprot ID: -
• Organism: Xanthomonas arboricola strain AHX463
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4524733..4536253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE336_RS19335 (SE336_19340)	-	4525441..4526115 (+)	675	WP_415916466.1	kinase	-
SE336_RS19340 (SE336_19345)	-	4526473..4528455 (-)	1983	WP_104623835.1	beta-N-acetylglucosaminidase domain-containing protein	-
SE336_RS19345 (SE336_19350)	-	4528771..4528905 (+)	135	WP_258077509.1	hypothetical protein	-
SE336_RS19350 (SE336_19355)	-	4528910..4529248 (-)	339	WP_016904463.1	P-II family nitrogen regulator	-
SE336_RS19355 (SE336_19360)	ubiK	4529439..4529717 (+)	279	WP_039816672.1	ubiquinone biosynthesis accessory factor UbiK	-
SE336_RS19360 (SE336_19365)	comM	4529733..4531253 (+)	1521	WP_104623836.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
SE336_RS19365 (SE336_19370)	-	4531535..4532044 (+)	510	WP_016904460.1	lipocalin family protein	-
SE336_RS19370 (SE336_19375)	-	4532670..4532846 (-)	177	WP_010374782.1	hypothetical protein	-
SE336_RS19375 (SE336_19380)	-	4533229..4534788 (+)	1560	WP_127158954.1	EAL domain-containing protein	-
SE336_RS19380 (SE336_19385)	-	4535104..4536228 (-)	1125	WP_024939708.1	fatty acid desaturase family protein	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 53765.46 Da
• Isoelectric Point: 8.1568

>NTDB_id=902520 SE336_RS19360 WP_104623836.1 4529733..4531253(+) (comM) [Xanthomonas arboricola strain AHX463]
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKEGGR
FDLPIALGILAASGQIDRQTLADYEFLGELALTGELRGVDGVLPAALAAAQAGRRLIVPLVNGAEAAVAGHVEAFTARTL
LEVCAALNGSQPAPAAEVAIPALGVRALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPGLLPESSE
AEALETAAITSVSGRGLDLARWRQRPYRAPHHTASAVALVGGGTHPRPGEISLAHNGVLFLDELPEWQRQTLEVLREPLE
SGLVTISRAARSVDFPARFQLVAAMNPCPCGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGN
LGEDSASMRTRVVAARQRQLARAGAPNAQLDQAQTDHHCRLEGDDQALLERAIEHLQLSARSMHRILRVARTIADLDDSA
AIATRHLTEAIGYRKLDRAIGTASAA

Nucleotide

• Length: 1521 bp

>NTDB_id=902520 SE336_RS19360 WP_104623836.1 4529733..4531253(+) (comM) [Xanthomonas arboricola strain AHX463]
ATGAGTCTGGCGCTGGTGCACAGCCGTGCCCGCGTGGGGGTGCATGCGCCTGAGGTTCGGGTGGAAGTGCATCTCTCCGG
CGGGCTTCCCTCCACCCAGATCGTGGGCCTGCCCGAGGCCGCGGTGCGCGAATCGCGCGAACGGGTGCGTGCGGCGCTGC
TGTGCGCACAATTCGAATTTCCCGCCCGGCGCATCACCATCAACCTGGCGCCGGCCGATTTGCCGAAGGAAGGCGGCCGC
TTCGACCTGCCGATCGCCCTCGGCATCCTGGCCGCCAGCGGGCAGATCGATCGCCAGACCCTGGCCGACTACGAGTTTCT
CGGCGAGCTGGCGCTGACCGGCGAGTTGCGTGGCGTCGATGGCGTGCTGCCGGCCGCGCTGGCTGCCGCGCAGGCCGGGC
GACGGTTGATCGTGCCGCTGGTCAACGGTGCCGAAGCGGCTGTCGCCGGGCATGTCGAGGCCTTTACCGCACGCACGCTG
CTGGAAGTCTGCGCCGCGCTCAACGGCAGCCAACCGGCGCCCGCTGCCGAGGTGGCGATCCCGGCGCTCGGCGTGCGCGC
GCTGCCCGACATGGCCGATGTGCGCGGCCAGCCGCACGCGCGTCGCGCGCTGGAGATCGCCGCTGCCGGTGGTCACCATT
TATTGCTGGTCGGCAGCCCTGGCTGCGGCAAGACTTTGCTTGCCTCGCGCCTGCCCGGCCTGTTGCCGGAATCCAGCGAG
GCCGAGGCACTGGAAACCGCTGCCATCACCTCGGTCAGCGGCCGCGGGCTGGATCTTGCGCGCTGGCGGCAGCGGCCCTA
CCGGGCCCCGCATCACACCGCCAGCGCGGTTGCGTTGGTCGGTGGCGGCACGCATCCGCGCCCCGGCGAGATCTCGTTGG
CCCACAACGGCGTGCTGTTTCTGGACGAATTGCCCGAGTGGCAGCGGCAGACGCTGGAAGTGTTGCGTGAGCCCCTGGAA
TCGGGCCTGGTGACGATCTCGCGCGCAGCGCGCAGCGTGGATTTCCCGGCACGGTTCCAGCTGGTTGCTGCCATGAACCC
GTGCCCATGCGGTTGGGCCGGCGATGGCAGCGGGCGTTGCCGCTGCAGCAGCGACAGCATCCGCCGCTACCGCAGCCGCA
TTTCCGGCCCGTTGCTGGACCGGATCGACCTGCATGTCGAAGTGCCGCGACTGCCCCCACAGGCCTTGCGCAGCGGCAAC
CTCGGCGAAGACAGCGCCAGCATGCGCACCCGCGTGGTCGCCGCACGCCAACGGCAACTCGCGCGTGCCGGCGCGCCCAA
CGCACAGCTGGATCAGGCACAGACCGATCATCATTGCCGCCTGGAAGGCGACGATCAGGCGCTGCTGGAACGCGCCATCG
AACACCTGCAGCTCTCCGCACGCTCGATGCATCGCATCCTGCGCGTGGCCCGCACCATTGCCGATCTCGACGACAGTGCG
GCCATTGCCACCCGGCATCTGACCGAGGCCATCGGTTACCGCAAACTGGATCGCGCCATCGGCACGGCGAGCGCGGCGTA
G

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	56.917	100	0.569
comM	Haemophilus influenzae Rd KW20	54.795	100	0.553
comM	Glaesserella parasuis strain SC1401	54.348	100	0.543
comM	Vibrio campbellii strain DS40M4	53.755	100	0.538
comM	Legionella pneumophila str. Paris	51.491	99.407	0.512
comM	Legionella pneumophila strain ERS1305867	51.491	99.407	0.512
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.443	100	0.464