Detailed information NTG0900485

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: R2H34_RS01435
• Genome accession: NZ_CP137746
• Coordinates: 309498..310985 (-)
• Length: 495 a.a.
• NCBI ID: WP_087540412.1
• Uniprot ID: -
• Organism: Acinetobacter sp. 16
• Function: ssDNA binding (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	308309..309463	309498..310985	flank	35

Gene organization within MGE regions

Location: 308309..310985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R2H34_RS01430	-	308309..309463 (+)	1155	WP_005003123.1	IS4 family transposase	-
R2H34_RS01435	comM	309498..310985 (-)	1488	WP_087540412.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 54325.97 Da
• Isoelectric Point: 7.7512

>NTDB_id=900485 R2H34_RS01435 WP_087540412.1 309498..310985(-) (comM) [Acinetobacter sp. 16]
MSFAKIYTRGLLGLHAPQIEVEVHISSGLPSLTIVGLPEAAVRESKDRVRSAIINSGFLFPTKRLTINLAPADLPKDGSR
LDLPIALGILIASGQLPENCTEGFEFIGELALDGHLRPTSGALTIAMACQQAKHHLVLPESNVDEANQLEDFQVYPAKHL
QDVCAHFSGSSQIKAAPQRSISSLSQYQYDLADVKGQLRPRRALEIAAAGGHSLLFKGPPGTGKTLLASRLPSILPPLNA
QENLEVASIYSVANAQHHFGQRPFRAPHHTASAIALVGGGSQPKPGEITLAHRGVLFLDELPEFDRKVLEVLRQPLESKE
IVISRAARQMTFPANFQFIAAMNPCPCGYAFNQDSRCQCSPENIQRYQNRISGPLLDRIDLHIDVPPLQAQELQDQKPSE
NSETVRQRVIKAYQQQIKRQQCLNQALSPQLLDQHARLDEGSAKIIEIAQQRLNLSARAYHRVLRVARTIADLAESEMIS
SSHLTEALSYRGSNS

Nucleotide

• Length: 1488 bp

>NTDB_id=900485 R2H34_RS01435 WP_087540412.1 309498..310985(-) (comM) [Acinetobacter sp. 16]
ATGTCTTTTGCAAAAATTTATACAAGGGGATTATTGGGGCTACATGCCCCTCAAATCGAGGTCGAAGTTCATATTAGTTC
TGGCCTACCCTCTTTAACTATCGTGGGTTTACCTGAGGCAGCAGTTCGAGAAAGTAAAGATCGCGTTCGATCCGCAATAA
TTAATAGTGGTTTTCTTTTCCCAACCAAACGTTTAACCATCAATTTAGCACCTGCAGACTTGCCCAAAGATGGGTCACGA
CTTGACCTGCCAATTGCATTGGGGATTTTAATCGCATCAGGTCAGCTTCCTGAAAATTGTACCGAAGGATTTGAATTTAT
TGGTGAACTTGCTTTGGATGGTCATTTACGTCCAACTTCAGGGGCATTAACTATTGCTATGGCTTGTCAGCAAGCTAAGC
ATCATTTAGTTCTTCCTGAATCAAATGTGGACGAGGCAAATCAACTAGAAGACTTTCAAGTTTATCCTGCCAAACATTTA
CAAGATGTATGTGCACATTTTTCGGGCAGTAGCCAAATAAAAGCCGCACCACAACGATCTATTTCATCATTATCACAATA
TCAATACGATCTTGCCGATGTTAAAGGTCAACTTCGTCCTCGCCGAGCATTAGAAATTGCGGCTGCAGGAGGTCATTCAT
TACTCTTTAAGGGACCACCTGGCACTGGAAAAACATTACTTGCATCTCGACTGCCTTCAATTTTACCCCCTTTGAATGCT
CAAGAAAATTTAGAGGTTGCTAGTATCTATTCCGTAGCAAATGCTCAACATCATTTCGGTCAGCGTCCTTTTCGTGCACC
TCACCATACAGCATCTGCGATCGCTTTGGTTGGTGGAGGCTCTCAACCAAAACCTGGAGAAATTACGCTTGCTCATCGCG
GCGTTTTGTTTTTAGATGAATTACCTGAATTCGACCGCAAAGTGCTTGAAGTTCTGCGCCAACCTTTAGAGTCTAAAGAA
ATCGTAATTTCTCGCGCGGCGAGACAAATGACCTTCCCTGCAAATTTTCAGTTTATCGCTGCAATGAATCCATGCCCTTG
TGGATATGCATTTAATCAAGATAGTCGTTGTCAGTGTTCTCCTGAAAATATTCAGCGTTATCAAAATCGAATTTCAGGTC
CACTTTTGGATCGAATTGATCTGCATATCGATGTTCCACCCTTGCAAGCTCAAGAGCTACAAGACCAAAAACCCTCAGAA
AACTCTGAAACTGTTCGTCAACGAGTGATAAAAGCATATCAGCAACAAATCAAAAGACAGCAATGCTTAAACCAAGCGCT
TTCACCTCAACTTTTGGATCAACATGCTCGTTTAGACGAGGGATCTGCAAAAATTATTGAAATAGCACAACAAAGATTAA
ATCTTTCTGCCCGTGCTTATCATCGGGTACTTCGCGTTGCAAGAACGATTGCTGACTTAGCTGAGAGTGAGATGATTTCT
AGCTCACATTTAACAGAAGCCTTGTCTTATCGAGGTAGCAATAGCTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	51.606	100	0.519
comM	Glaesserella parasuis strain SC1401	50.4	100	0.509
comM	Vibrio campbellii strain DS40M4	49.899	100	0.499
comM	Haemophilus influenzae Rd KW20	49.299	100	0.497
comM	Legionella pneumophila str. Paris	48.193	100	0.485
comM	Legionella pneumophila strain ERS1305867	48.193	100	0.485
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.817	100	0.465