Detailed information NTG0899250

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: R5H38_RS08155
• Genome accession: NZ_CP137602
• Coordinates: 1583340..1584839 (-)
• Length: 499 a.a.
• NCBI ID: WP_274504253.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 221006
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1578340..1589839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5H38_RS08135	thrC	1578711..1580195 (-)	1485	WP_217374203.1	threonine synthase	-
R5H38_RS08140	amiF	1580407..1581330 (-)	924	WP_277837437.1	ATP-binding cassette domain-containing protein	Regulator
R5H38_RS08145	amiE	1581340..1582404 (-)	1065	WP_274504252.1	ABC transporter ATP-binding protein	Regulator
R5H38_RS08150	amiD	1582414..1583340 (-)	927	WP_274504946.1	oligopeptide ABC transporter permease OppC	Regulator
R5H38_RS08155	amiC	1583340..1584839 (-)	1500	WP_274504253.1	ABC transporter permease	Regulator
R5H38_RS08160	amiA	1584917..1586884 (-)	1968	WP_318150540.1	peptide ABC transporter substrate-binding protein	Regulator
R5H38_RS08165	pbp3	1587098..1588339 (+)	1242	WP_277837440.1	D-alanyl-D-alanine carboxypeptidase PBP3	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 56475.35 Da
• Isoelectric Point: 8.1135

>NTDB_id=899250 R5H38_RS08155 WP_274504253.1 1583340..1584839(-) (amiC) [Streptococcus parasuis strain 221006]
MKKYVFKRVLRSLFSLFMVTTLIYSIIYTMVPRKKIFEKDATYTKMAKDPDSKTDYVNTVYEKMGYIEYLNPKELQEAAV
EVDSSVTVEPTDTNKKIYEEYVLKLGKNWVLHQFEGSQSIYATREIPIYERVIDFYGNMFEFDHVNKVQDPENPDLERYI
RFENDPAIGWSLVGSGTEHKYLLYFNSQFPFIHQNFVNLNLGVSYPTYANVEVLDVLTNGQGKTISTDVTFPTGEVKKSS
IDIYSRTYKSPSVADAKDKANFGDDPYTATKSRYKDPSMIVNSSIIGLISVFITYILGIPLGILMARFKNKGFDVVTTAI
FSFLMALPSIAFIYIFRFAFGQIFNLPDTFPVLGASDPRSYLFPAVLLGLLSTPWTAIWIRRYFIDLQNSDYVRFARAKG
LSESEISRTHIFRNAMVPVIHSVPAAIVGVIVGATFTESVFAFPGMGKMLIDSINVSNNNMVVALSFIFAGINIFALLLG
DLLMTLVDPRIKLDVKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=899250 R5H38_RS08155 WP_274504253.1 1583340..1584839(-) (amiC) [Streptococcus parasuis strain 221006]
ATGAAAAAGTATGTTTTCAAACGTGTCCTACGTTCGTTATTCTCTCTTTTTATGGTTACCACTTTGATTTATTCAATCAT
TTATACAATGGTTCCTAGAAAGAAAATTTTTGAAAAGGATGCAACATACACTAAAATGGCTAAGGATCCGGACAGTAAGA
CTGACTATGTCAATACTGTCTATGAGAAAATGGGCTATATTGAATATCTAAATCCTAAAGAGTTACAAGAAGCTGCTGTT
GAGGTTGATAGTAGTGTGACTGTAGAACCTACAGATACTAATAAAAAAATATACGAAGAGTATGTCCTCAAGCTAGGAAA
AAACTGGGTACTTCATCAATTTGAGGGAAGCCAGTCTATTTATGCGACTAGAGAAATACCGATTTATGAGCGAGTAATTG
ATTTCTATGGAAATATGTTCGAGTTTGATCATGTCAATAAGGTTCAAGACCCGGAAAATCCTGATTTAGAACGTTACATT
CGCTTTGAAAATGATCCTGCAATTGGTTGGTCACTTGTTGGTTCTGGGACTGAGCATAAGTATCTTCTTTACTTTAACTC
ACAATTTCCATTTATTCATCAAAATTTTGTCAATCTAAACCTAGGTGTATCCTATCCAACATATGCAAATGTTGAAGTAC
TTGACGTTTTAACAAATGGTCAGGGGAAAACAATCTCAACAGATGTGACTTTCCCAACTGGTGAAGTAAAGAAATCGTCT
ATTGATATCTATAGCAGAACCTATAAGTCACCGAGTGTTGCAGATGCCAAGGATAAAGCAAATTTTGGAGATGATCCATA
TACTGCAACAAAGAGTCGATATAAAGATCCATCTATGATAGTCAACTCTTCAATAATTGGGTTAATTAGTGTATTTATAA
CATATATACTTGGTATTCCATTGGGAATACTTATGGCAAGATTTAAAAATAAAGGTTTTGATGTTGTTACAACAGCGATT
TTTAGTTTCCTAATGGCACTTCCTAGTATTGCATTCATTTATATATTCAGATTTGCTTTTGGTCAGATTTTTAATCTACC
TGATACTTTTCCAGTCCTTGGTGCTTCTGATCCGAGGTCATACCTATTTCCTGCTGTTTTATTAGGATTATTAAGTACAC
CTTGGACAGCAATTTGGATACGTCGTTACTTTATTGATTTACAAAATAGTGATTATGTGCGTTTTGCAAGAGCGAAAGGA
TTATCTGAATCTGAAATTTCACGAACACATATTTTTAGAAATGCGATGGTCCCAGTTATTCATAGTGTACCAGCAGCGAT
TGTTGGTGTAATTGTTGGGGCAACATTTACTGAATCAGTATTTGCATTTCCTGGGATGGGTAAAATGTTGATTGATTCAA
TTAACGTTAGCAATAATAACATGGTAGTTGCATTATCATTTATATTTGCAGGTATCAATATTTTTGCGCTATTATTGGGT
GATTTATTAATGACTTTAGTTGATCCACGAATAAAACTTGATGTGAAAGGGGGCAAATGA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	63.928	100	0.639
amiC	Streptococcus thermophilus LMG 18311	63.126	100	0.631
amiC	Streptococcus thermophilus LMD-9	62.725	100	0.627