Detailed information NTG0899144

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: R6U48_RS05170
• Genome accession: NZ_CP137562
• Coordinates: 1099494..1100987 (-)
• Length: 497 a.a.
• NCBI ID: WP_023110533.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain CPA0087
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1094494..1105987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6U48_RS05155 (R6U48_05155)	-	1095225..1096142 (+)	918	WP_003098255.1	LysR substrate-binding domain-containing protein	-
R6U48_RS05160 (R6U48_05160)	pchP	1096293..1097342 (+)	1050	WP_031631470.1	phosphorylcholine phosphatase	-
R6U48_RS05165 (R6U48_05165)	betT	1097385..1099369 (-)	1985	Protein_1016	choline BCCT transporter BetT	-
R6U48_RS05170 (R6U48_05170)	comM	1099494..1100987 (-)	1494	WP_023110533.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
R6U48_RS05175 (R6U48_05175)	-	1101028..1101288 (-)	261	WP_003096478.1	accessory factor UbiK family protein	-
R6U48_RS05180 (R6U48_05180)	glnK	1101728..1102066 (+)	339	WP_003096476.1	P-II family nitrogen regulator	-
R6U48_RS05185 (R6U48_05185)	-	1102106..1103434 (+)	1329	WP_003098243.1	ammonium transporter	-
R6U48_RS05190 (R6U48_05190)	-	1103694..1104119 (+)	426	WP_003096441.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
R6U48_RS05195 (R6U48_05195)	sutA	1104197..1104514 (+)	318	WP_003098240.1	transcriptional regulator SutA	-
R6U48_RS05200 (R6U48_05200)	-	1104938..1105852 (+)	915	WP_031631468.1	fimbrial protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53055.02 Da
• Isoelectric Point: 7.9584

>NTDB_id=899144 R6U48_RS05170 WP_023110533.1 1099494..1100987(-) (comM) [Pseudomonas aeruginosa strain CPA0087]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLKHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEVSERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRAMTST

Nucleotide

• Length: 1494 bp

>NTDB_id=899144 R6U48_RS05170 WP_023110533.1 1099494..1100987(-) (comM) [Pseudomonas aeruginosa strain CPA0087]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTACCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGGGCGATCCGGCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCCGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAAGCCCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAAGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTCGGCGATCCCAGTGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGGTCAGCGAACGGGTGGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGATCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAATGACCTCCACGTGA

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.186	100	0.567
comM	Vibrio campbellii strain DS40M4	56.74	100	0.567
comM	Vibrio cholerae strain A1552	56.338	100	0.563
comM	Glaesserella parasuis strain SC1401	55.179	100	0.557
comM	Legionella pneumophila str. Paris	49.9	100	0.501
comM	Legionella pneumophila strain ERS1305867	49.9	100	0.501
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.866	100	0.469