Detailed information NTG0898282

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: R5028_RS23640
• Genome accession: NZ_CP137486
• Coordinates: 5036809..5038302 (-)
• Length: 497 a.a.
• NCBI ID: WP_034013664.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain HPA2660
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 5031809..5043302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5028_RS23625 (R5028_23625)	-	5032539..5033456 (+)	918	WP_034013663.1	LysR substrate-binding domain-containing protein	-
R5028_RS23630 (R5028_23630)	pchP	5033607..5034656 (+)	1050	WP_003110458.1	phosphorylcholine phosphatase	-
R5028_RS23635 (R5028_23635)	betT	5034699..5036684 (-)	1986	WP_003096496.1	choline BCCT transporter BetT	-
R5028_RS23640 (R5028_23640)	comM	5036809..5038302 (-)	1494	WP_034013664.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
R5028_RS23645 (R5028_23645)	-	5038343..5038603 (-)	261	WP_003096478.1	accessory factor UbiK family protein	-
R5028_RS23650 (R5028_23650)	glnK	5039043..5039381 (+)	339	WP_003096476.1	P-II family nitrogen regulator	-
R5028_RS23655 (R5028_23655)	-	5039421..5040749 (+)	1329	WP_023092758.1	ammonium transporter	-
R5028_RS23660 (R5028_23660)	-	5041010..5041435 (+)	426	WP_003096441.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
R5028_RS23665 (R5028_23665)	sutA	5041513..5041830 (+)	318	WP_003098240.1	transcriptional regulator SutA	-
R5028_RS23670 (R5028_23670)	-	5042254..5043168 (+)	915	WP_003163071.1	fimbrial protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53125.01 Da
• Isoelectric Point: 7.7576

>NTDB_id=898282 R5028_RS23640 WP_034013664.1 5036809..5038302(-) (comM) [Pseudomonas aeruginosa strain HPA2660]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPEHGE
TATAEVSERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRATTST

Nucleotide

• Length: 1494 bp

>NTDB_id=898282 R5028_RS23640 WP_034013664.1 5036809..5038302(-) (comM) [Pseudomonas aeruginosa strain HPA2660]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTACCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGTCCGGGGCGATCCGGCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCCGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAAGCCCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTACTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGCGGCTACCTGGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGAACACGGCGAA
ACCGCTACTGCCGAGGTCAGCGAACGGGTTGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGATCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAACGACCTCCACGTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.206	100	0.565
comM	Vibrio campbellii strain DS40M4	56.452	99.799	0.563
comM	Vibrio cholerae strain A1552	56.048	99.799	0.559
comM	Glaesserella parasuis strain SC1401	54.563	100	0.553
comM	Legionella pneumophila str. Paris	50.1	100	0.503
comM	Legionella pneumophila strain ERS1305867	50.1	100	0.503
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.957	100	0.469