Detailed information NTG0895515

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R4699_RS10230
• Genome accession: NZ_CP137105
• Coordinates: 2035630..2036064 (+)
• Length: 144 a.a.
• NCBI ID: WP_000608686.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16H2092
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2030630..2041064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4699_RS10205	-	2031787..2032845 (+)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-
R4699_RS10210	-	2032996..2033361 (+)	366	WP_000286415.1	DUF1033 family protein	-
R4699_RS10215	comGA/cglA/cilD	2033437..2034378 (+)	942	WP_050104907.1	competence type IV pilus ATPase ComGA	Machinery gene
R4699_RS10220	comGB/cglB	2034326..2035342 (+)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
R4699_RS10225	comGC/cglC	2035344..2035667 (+)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
R4699_RS10230	comGD/cglD	2035630..2036064 (+)	435	WP_000608686.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4699_RS10235	comGE/cglE	2036027..2036329 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4699_RS10240	comGF/cglF	2036292..2036753 (+)	462	WP_000250520.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4699_RS10245	comGG/cglG	2036731..2037144 (+)	414	WP_000265615.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4699_RS10250	-	2037281..2037868 (+)	588	WP_000679776.1	class I SAM-dependent methyltransferase	-
R4699_RS10255	comYH	2037929..2038882 (+)	954	WP_044813830.1	class I SAM-dependent methyltransferase	Machinery gene
R4699_RS10260	-	2038933..2040123 (+)	1191	WP_050085692.1	acetate kinase	-
R4699_RS10265	-	2040124..2040255 (+)	132	WP_000768904.1	hypothetical protein	-
R4699_RS10270	rnpA	2040272..2040643 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15786.23 Da
• Isoelectric Point: 10.3971

>NTDB_id=895515 R4699_RS10230 WP_000608686.1 2035630..2036064(+) (comGD/cglD) [Streptococcus pneumoniae strain 16H2092]
MINKILVKSLKIKAFTILESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNSDGQT
ISNGSQKLPVPKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=895515 R4699_RS10230 WP_000608686.1 2035630..2036064(+) (comGD/cglD) [Streptococcus pneumoniae strain 16H2092]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATACTTGAAAGTCTCTTGGTTTTGGGTCTTGT
GAGTATCCTTGCCCTGGGCTTGTCCGGCTCTGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATAGGGAAACCCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTCAGATGGGCAGACG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGATCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.056	100	0.931
comGD/cglD	Streptococcus pneumoniae TIGR4	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae Rx1	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae D39	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae R6	95.489	92.361	0.882
comGD/cglD	Streptococcus mitis SK321	94.737	92.361	0.875
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437