Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | AAYR29_RS01950 | Genome accession | NZ_CP154918 |
| Coordinates | 339586..340590 (+) | Length | 334 a.a. |
| NCBI ID | WP_003229718.1 | Uniprot ID | O32055 |
| Organism | Bacillus subtilis strain FUA2231 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 334586..345590
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAYR29_RS01915 (AAYR29_01915) | - | 334656..334730 (-) | 75 | Protein_324 | hypothetical protein | - |
| AAYR29_RS01920 (AAYR29_01920) | - | 334815..334937 (+) | 123 | WP_141949554.1 | hypothetical protein | - |
| AAYR29_RS01925 (AAYR29_01925) | yrzF | 334983..335630 (-) | 648 | WP_032722259.1 | phosphotransferase | - |
| AAYR29_RS01930 (AAYR29_01930) | iolG | 335868..336893 (+) | 1026 | WP_345806021.1 | inositol 2-dehydrogenase | - |
| AAYR29_RS01935 (AAYR29_01935) | csbX | 336964..338271 (+) | 1308 | WP_003246197.1 | MFS transporter | - |
| AAYR29_RS01940 (AAYR29_01940) | bofC | 338319..338831 (+) | 513 | WP_003229715.1 | sporulation cell-cell signaling protein BofC | - |
| AAYR29_RS01945 (AAYR29_01945) | ruvA | 338970..339575 (+) | 606 | WP_003229717.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| AAYR29_RS01950 (AAYR29_01950) | ruvB | 339586..340590 (+) | 1005 | WP_003229718.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| AAYR29_RS01955 (AAYR29_01955) | yrzS | 340583..340783 (+) | 201 | WP_003222669.1 | DUF2905 domain-containing protein | - |
| AAYR29_RS01960 (AAYR29_01960) | queA | 340813..341841 (+) | 1029 | WP_003229723.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| AAYR29_RS01965 (AAYR29_01965) | tgt | 341868..343013 (+) | 1146 | WP_003229725.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| AAYR29_RS01970 (AAYR29_01970) | yajC | 343050..343316 (+) | 267 | WP_004398708.1 | preprotein translocase subunit YajC | - |
| AAYR29_RS01975 (AAYR29_01975) | - | 343373..343762 (-) | 390 | WP_014477528.1 | TIGR04086 family membrane protein | - |
| AAYR29_RS01980 (AAYR29_01980) | yrbG | 343960..344616 (+) | 657 | WP_345806493.1 | DUF421 domain-containing protein | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37467.78 Da Isoelectric Point: 5.1631
>NTDB_id=894912 AAYR29_RS01950 WP_003229718.1 339586..340590(+) (ruvB) [Bacillus subtilis strain FUA2231]
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
Nucleotide
Download Length: 1005 bp
>NTDB_id=894912 AAYR29_RS01950 WP_003229718.1 339586..340590(+) (ruvB) [Bacillus subtilis strain FUA2231]
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGGCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGGCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ruvB | Streptococcus pneumoniae TIGR4 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae R6 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae D39 |
60.429 |
97.605 |
0.59 |
| ruvB | Synechocystis sp. PCC 6803 |
57.143 |
98.503 |
0.563 |
| ruvB | Helicobacter pylori 26695 |
52.744 |
98.204 |
0.518 |