Detailed information NTG0894911

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AAYR29_RS01945
• Genome accession: NZ_CP154918
• Coordinates: 338970..339575 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain FUA2231
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 333970..344575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS01905 (AAYR29_01905)	-	334137..334277 (-)	141	WP_004398683.1	hypothetical protein	-
AAYR29_RS01910 (AAYR29_01910)	-	334284..334652 (-)	369	WP_257434842.1	DUF5412 domain-containing protein	-
AAYR29_RS01915 (AAYR29_01915)	-	334656..334730 (-)	75	Protein_324	hypothetical protein	-
AAYR29_RS01920 (AAYR29_01920)	-	334815..334937 (+)	123	WP_141949554.1	hypothetical protein	-
AAYR29_RS01925 (AAYR29_01925)	yrzF	334983..335630 (-)	648	WP_032722259.1	phosphotransferase	-
AAYR29_RS01930 (AAYR29_01930)	iolG	335868..336893 (+)	1026	WP_345806021.1	inositol 2-dehydrogenase	-
AAYR29_RS01935 (AAYR29_01935)	csbX	336964..338271 (+)	1308	WP_003246197.1	MFS transporter	-
AAYR29_RS01940 (AAYR29_01940)	bofC	338319..338831 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
AAYR29_RS01945 (AAYR29_01945)	ruvA	338970..339575 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AAYR29_RS01950 (AAYR29_01950)	ruvB	339586..340590 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AAYR29_RS01955 (AAYR29_01955)	yrzS	340583..340783 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AAYR29_RS01960 (AAYR29_01960)	queA	340813..341841 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AAYR29_RS01965 (AAYR29_01965)	tgt	341868..343013 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AAYR29_RS01970 (AAYR29_01970)	yajC	343050..343316 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AAYR29_RS01975 (AAYR29_01975)	-	343373..343762 (-)	390	WP_014477528.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=894911 AAYR29_RS01945 WP_003229717.1 338970..339575(+) (ruvA) [Bacillus subtilis strain FUA2231]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=894911 AAYR29_RS01945 WP_003229717.1 338970..339575(+) (ruvA) [Bacillus subtilis strain FUA2231]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408