Detailed information NTG0894839

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L04_RS02665
• Genome accession: NZ_CP137075
• Coordinates: 544664..545722 (-)
• Length: 352 a.a.
• NCBI ID: WP_005119265.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SNUBHAB0006
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 539664..550722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L04_RS02640 (R3L04_02645)	aroK	539939..540508 (-)	570	WP_000643712.1	shikimate kinase AroK	-
R3L04_RS02645 (R3L04_02650)	pilQ	540520..542685 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L04_RS02650 (R3L04_02655)	pilP	542748..543275 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L04_RS02655 (R3L04_02660)	pilO	543286..544026 (-)	741	WP_000076097.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L04_RS02660 (R3L04_02665)	pilN	544023..544664 (-)	642	WP_031958555.1	PilN domain-containing protein	Machinery gene
R3L04_RS02665 (R3L04_02670)	pilM	544664..545722 (-)	1059	WP_005119265.1	pilus assembly protein PilM	Machinery gene
R3L04_RS02670 (R3L04_02675)	ponA	545883..548438 (+)	2556	WP_000736683.1	penicillin-binding protein PBP1a	-
R3L04_RS02675 (R3L04_02680)	-	548456..549280 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
R3L04_RS02680 (R3L04_02685)	-	549283..549615 (-)	333	WP_000169603.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39000.54 Da
• Isoelectric Point: 4.4618

>NTDB_id=894839 R3L04_RS02665 WP_005119265.1 544664..545722(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0006]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDSEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894839 R3L04_RS02665 WP_005119265.1 544664..545722(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0006]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTCTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.432	100	0.994
comM	Acinetobacter nosocomialis M2	98.58	100	0.986
comM	Acinetobacter baylyi ADP1	80.966	100	0.81
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418