Detailed information NTG0894424

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L13_RS08945
• Genome accession: NZ_CP137055
• Coordinates: 1861462..1862520 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SNUBHAB0137
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1856462..1867520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L13_RS08920 (R3L13_08940)	aroK	1856737..1857306 (-)	570	WP_000643712.1	shikimate kinase AroK	-
R3L13_RS08925 (R3L13_08945)	pilQ	1857318..1859483 (-)	2166	WP_002062175.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L13_RS08930 (R3L13_08950)	pilP	1859546..1860073 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L13_RS08935 (R3L13_08955)	pilO	1860084..1860824 (-)	741	WP_000081156.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L13_RS08940 (R3L13_08960)	pilN	1860821..1861462 (-)	642	WP_000201224.1	PilN domain-containing protein	Machinery gene
R3L13_RS08945 (R3L13_08965)	pilM	1861462..1862520 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
R3L13_RS08950 (R3L13_08970)	ponA	1862683..1865238 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
R3L13_RS08955 (R3L13_08975)	-	1865256..1866080 (-)	825	WP_264453049.1	putative RNA methyltransferase	-
R3L13_RS08960 (R3L13_08980)	-	1866083..1866415 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=894424 R3L13_RS08945 WP_002014066.1 1861462..1862520(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0137]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894424 R3L13_RS08945 WP_002014066.1 1861462..1862520(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0137]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423