Detailed information NTG0894114

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: R0D99_RS03975
• Genome accession: NZ_CP136995
• Coordinates: 824886..826376 (-)
• Length: 496 a.a.
• NCBI ID: WP_416365986.1
• Uniprot ID: -
• Organism: Ottowia sp. SB7-C50
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 819886..831376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0D99_RS03965 (R0D99_03965)	-	821051..823966 (-)	2916	WP_317750081.1	ribonucleoside-diphosphate reductase subunit alpha	-
R0D99_RS03970 (R0D99_03970)	ampD	824303..824914 (-)	612	WP_317750082.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
R0D99_RS03975 (R0D99_03975)	pilR	824886..826376 (-)	1491	WP_416365986.1	sigma-54-dependent transcriptional regulator	Regulator
R0D99_RS03980 (R0D99_03980)	-	826419..828116 (-)	1698	WP_317750084.1	PAS domain-containing sensor histidine kinase	-
R0D99_RS03985 (R0D99_03985)	-	828430..828654 (-)	225	WP_317750085.1	PP0621 family protein	-
R0D99_RS03990 (R0D99_03990)	-	828651..829460 (-)	810	WP_317750086.1	cytochrome C assembly family protein	-
R0D99_RS03995 (R0D99_03995)	ffh	829631..831061 (+)	1431	WP_317750087.1	signal recognition particle protein	-

Sequence

Protein

• Length: 496 a.a.
• Molecular weight: 53184.62 Da
• Isoelectric Point: 5.0827

>NTDB_id=894114 R0D99_RS03975 WP_416365986.1 824886..826376(-) (pilR) [Ottowia sp. SB7-C50]
MAPEAARLLVVDDEPDLRTLYELTLLREGHQVEAAGSLTEARALLQAQAYDVVITDMRLPDGLGLELLREMAAAQRRERC
IMITAYGSAENAVEALKCGAFDYLTKPVDLKQFRSVVQSALNSPQPPHAAFRAQAAAEPPAAPAAAADAAPAPSPVLARM
VGDSAAMRAVKHRITKVARSMAPVLVRGESGTGKELVAQAIHGCSHRGGGPFVPVNCGAIPENLLEAEFFGARKGSYTGA
VADREGFFQAARGGTLFLDEIGDLPLQMQAKLLRAIQERRVRPLGETQEEAVDVRVVSATHKDLAAEVQAGRFRQDLYYR
LNVIEIVVPPLRERREDLPALCDTLLARIGADAGLPVPRLTAAQLDEILQAPLEGNVRELENLLHRAVALGDAGDSVFDE
PPAPIQGAYSAIELEANATPPLPAPTADDAVPLPANLETWLDAQERAVLVRALAETGFNRTAAAARLGLNLRQMRYRMSR
LGITAPHHDESNGDAG

Nucleotide

• Length: 1491 bp

>NTDB_id=894114 R0D99_RS03975 WP_416365986.1 824886..826376(-) (pilR) [Ottowia sp. SB7-C50]
ATGGCACCCGAGGCCGCCCGCCTGCTGGTGGTGGACGACGAACCGGATCTGCGCACCCTGTACGAACTGACCCTGCTGCG
CGAGGGCCACCAGGTCGAGGCCGCGGGATCGCTGACCGAGGCGCGCGCGCTGCTGCAGGCCCAGGCCTACGACGTGGTGA
TCACCGACATGCGTCTGCCCGACGGGCTGGGGCTGGAACTGCTGCGCGAGATGGCGGCCGCGCAGCGGCGTGAGCGCTGC
ATCATGATCACCGCCTACGGCTCGGCCGAGAACGCGGTGGAGGCGCTGAAGTGCGGCGCGTTCGACTACCTGACCAAGCC
GGTCGACCTCAAGCAGTTCCGGTCGGTCGTGCAGTCCGCACTGAATTCGCCCCAACCGCCCCACGCCGCGTTCAGGGCGC
AGGCCGCGGCAGAGCCCCCGGCGGCGCCTGCCGCCGCTGCGGATGCCGCCCCCGCACCCTCCCCAGTGCTGGCGCGCATG
GTGGGCGATTCCGCCGCCATGCGTGCGGTCAAGCACCGCATCACCAAGGTGGCGCGCAGCATGGCGCCGGTGCTGGTACG
GGGTGAATCCGGCACCGGCAAGGAATTGGTCGCGCAGGCCATCCATGGCTGCAGCCACCGCGGCGGCGGGCCGTTCGTGC
CGGTCAACTGCGGCGCGATCCCCGAGAACTTGCTGGAAGCCGAATTCTTCGGCGCGCGCAAGGGCTCGTACACCGGCGCC
GTGGCCGACCGCGAAGGCTTTTTTCAGGCGGCGCGCGGCGGCACGCTGTTTCTGGACGAGATCGGCGACCTGCCGCTGCA
GATGCAGGCCAAGCTGCTGCGCGCCATTCAGGAGCGGCGCGTGCGCCCGCTGGGCGAAACGCAGGAAGAAGCGGTGGACG
TGCGCGTGGTCAGCGCCACGCACAAGGACCTGGCCGCCGAAGTGCAGGCCGGGCGCTTCCGGCAGGACTTGTATTACCGC
CTGAACGTGATCGAGATCGTGGTGCCGCCGCTGCGCGAACGGCGCGAAGACCTGCCCGCGCTGTGCGACACGCTGCTGGC
GCGCATCGGCGCCGACGCCGGCCTGCCGGTGCCGCGCCTGACGGCCGCGCAGCTCGACGAAATTCTGCAGGCGCCGCTGG
AAGGCAACGTGCGTGAGCTGGAGAACCTGCTGCACCGCGCGGTAGCGCTAGGCGATGCCGGAGATTCGGTATTCGACGAG
CCGCCAGCGCCCATCCAGGGCGCGTATTCAGCTATCGAATTGGAAGCAAACGCGACGCCGCCGTTGCCCGCGCCGACGGC
CGACGATGCCGTGCCGCTGCCCGCCAACCTGGAAACCTGGCTGGACGCGCAGGAGCGCGCTGTGCTGGTGCGCGCGCTGG
CCGAGACCGGCTTCAACCGAACCGCCGCCGCCGCCCGTCTGGGGCTGAACCTGCGGCAGATGCGCTACCGCATGTCGCGC
CTGGGCATCACCGCGCCCCACCATGACGAATCCAACGGCGATGCCGGTTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (442-480)

• Response regulator receiver domain (Response_reg) (9-117)

• Sigma-54 interaction domain (Sigma54_activat) (160-326)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	50.104	96.976	0.486
pilR	Acinetobacter baumannii strain A118	40.535	97.984	0.397