Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R3J29_RS04820 Genome accession   NZ_CP136974
Coordinates   1106934..1107350 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   A0A060H0R7
Organism   Xylella fastidiosa subsp. multiplex strain CFBP8075     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1101934..1112350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3J29_RS04805 (R3J29_04800) - 1103739..1104548 (-) 810 WP_222927431.1 DUF6216 family protein -
  R3J29_RS04810 (R3J29_04805) - 1104857..1105732 (-) 876 WP_004085461.1 energy transducer TonB -
  R3J29_RS04815 (R3J29_04810) gshB 1105734..1106678 (-) 945 WP_004085460.1 glutathione synthase -
  R3J29_RS04820 (R3J29_04815) pilG 1106934..1107350 (+) 417 WP_004085459.1 PleD family two-component system response regulator Regulator
  R3J29_RS04825 (R3J29_04820) - 1107367..1107897 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  R3J29_RS04830 (R3J29_04825) - 1107937..1109979 (+) 2043 WP_071869554.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=893945 R3J29_RS04820 WP_004085459.1 1106934..1107350(+) (pilG) [Xylella fastidiosa subsp. multiplex strain CFBP8075]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=893945 R3J29_RS04820 WP_004085459.1 1106934..1107350(+) (pilG) [Xylella fastidiosa subsp. multiplex strain CFBP8075]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATCGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCATCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060H0R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652