Detailed information NTG0892748

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: RYQ61_RS08925
• Genome accession: NZ_CP136799
• Coordinates: 1771673..1773907 (-)
• Length: 744 a.a.
• NCBI ID: WP_102567986.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain XH2169
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1766673..1778907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYQ61_RS08900 (RYQ61_08900)	-	1766990..1768264 (-)	1275	WP_020998595.1	dihydroorotase	-
RYQ61_RS08905 (RYQ61_08905)	-	1768276..1768746 (-)	471	WP_020998594.1	8-oxo-dGTP diphosphatase	-
RYQ61_RS08910 (RYQ61_08910)	-	1768773..1769426 (-)	654	WP_009568677.1	uracil-DNA glycosylase	-
RYQ61_RS08915 (RYQ61_08915)	-	1769455..1770441 (-)	987	WP_020998593.1	Gfo/Idh/MocA family protein	-
RYQ61_RS08920 (RYQ61_08920)	-	1770882..1771595 (-)	714	WP_102567987.1	DUF805 domain-containing protein	-
RYQ61_RS08925 (RYQ61_08925)	comEC/celB	1771673..1773907 (-)	2235	WP_102567986.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RYQ61_RS08930 (RYQ61_08930)	comEA/celA/cilE	1773891..1774595 (-)	705	WP_102567985.1	helix-hairpin-helix domain-containing protein	Machinery gene
RYQ61_RS08935 (RYQ61_08935)	smpB	1774763..1775230 (-)	468	WP_096362894.1	SsrA-binding protein SmpB	-
RYQ61_RS08940 (RYQ61_08940)	rnr	1775396..1777532 (-)	2137	Protein_1716	ribonuclease R	-
RYQ61_RS08945 (RYQ61_08945)	secG	1777623..1777856 (-)	234	WP_003024744.1	preprotein translocase subunit SecG	-
RYQ61_RS08950 (RYQ61_08950)	rpmG	1777896..1778045 (-)	150	WP_003034401.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 85228.24 Da
• Isoelectric Point: 10.1219

>NTDB_id=892748 RYQ61_RS08925 WP_102567986.1 1771673..1773907(-) (comEC/celB) [Streptococcus intermedius strain XH2169]
MSQWIKIFPIKPIYIAFLLVWLYFAIYQSNWLAGVGLIFLLIRLSRIYSLKEWFTTFMILACFAVFFLVRRELADRKIKV
EAPPVRQVAVLPDTIKVNGDSLSFRGKAKGQTYQIYYKLKSKKEKLAFQNLSSLVTLTVEGEFESPEKQRNFSGFDYQSY
LKTQGIYRILKVDQILSSQDRISLQPFEWLSSWRRKALVFIKRNFPNPMSNYMTGLLFGALDTDFGEMNNLYSSLGIIHL
FALSGMQVGFFMEGFRKSLLRLGLTQEIVHKCQYPFSFFYAGMTGFSVSVVRSLIQKLLSQHGVTKLDNFALTIMVLSLI
MPSFLLTAGGVLSCAYAFIISVLDFKGLTPYKKIIIESIVISLGILPILIFYFGEFQPWSILLTFVFSLIFDIVMLPGLT
IIFLVSPFIKLTQVNFLFECLESSICWLASMFSRPVVLGKPNPLLLIAMLLVLAILYDIRQNKKWLIFLSLFLSLLFFVA
KFPLQNEITMIDVGKGDSIFMRDWRGSTVLIDVGGREEIRKKESWQERISSSNAERTLIPYLKSRGVDTIDTLVLTNPNS
DYAGDVLEVAKKFSIKKIFISRSSLNDADFLNKLKETRAFVHVVKQGDKLPIFDHHLQVLSGTNKSDQSLVLYGQFFRTR
FLFMSNLTEEDEVKLMQLYPKLKTDVLKVGQHGSQNSSSSKFLQQVRPVIALISTGKNNSSKSLSQETIERFDRLNTKIY
RTDKQGAIKFSGWTTWQLETVQQP

Nucleotide

• Length: 2235 bp

>NTDB_id=892748 RYQ61_RS08925 WP_102567986.1 1771673..1773907(-) (comEC/celB) [Streptococcus intermedius strain XH2169]
ATGTCACAGTGGATTAAGATATTTCCAATCAAACCAATTTACATTGCTTTCTTACTTGTCTGGTTATATTTTGCAATCTA
TCAAAGTAATTGGTTGGCAGGAGTGGGATTGATCTTTCTGTTAATTCGTCTTTCTCGCATATATTCGCTAAAAGAATGGT
TTACAACTTTCATGATTCTCGCTTGTTTTGCTGTTTTTTTCCTTGTTCGTAGGGAACTGGCGGATCGGAAGATAAAAGTA
GAAGCTCCTCCTGTAAGACAAGTTGCGGTTTTACCTGATACAATTAAGGTAAATGGAGATTCGCTTTCTTTTCGTGGTAA
AGCAAAAGGACAGACATATCAAATTTACTACAAATTGAAATCAAAAAAAGAAAAGTTGGCTTTTCAAAATCTATCCAGCC
TTGTCACATTAACTGTTGAGGGGGAATTTGAATCTCCTGAAAAGCAGCGCAATTTTTCTGGTTTTGATTATCAATCCTAT
CTAAAAACACAAGGGATTTATCGAATTTTAAAGGTGGATCAAATTTTGTCTAGTCAAGATAGGATTAGCCTCCAACCGTT
TGAGTGGCTGTCTAGCTGGCGAAGAAAAGCATTGGTTTTCATTAAGAGAAATTTCCCGAATCCAATGAGCAATTATATGA
CAGGGCTTTTGTTCGGAGCTTTGGATACAGATTTTGGTGAAATGAATAACCTTTATTCGAGCTTGGGAATTATTCATTTA
TTTGCATTGTCTGGTATGCAAGTTGGTTTTTTTATGGAAGGGTTTCGTAAGTCACTGTTGAGATTGGGGCTTACGCAGGA
AATAGTTCATAAATGTCAATATCCATTTTCTTTTTTTTATGCTGGAATGACAGGTTTTTCAGTATCCGTTGTACGGAGTT
TAATTCAGAAATTATTGTCACAACACGGCGTTACTAAGTTAGATAATTTTGCTTTAACAATAATGGTGTTGTCCTTGATT
ATGCCCTCCTTTCTTTTAACAGCAGGAGGAGTACTTTCTTGTGCGTATGCTTTTATCATTAGCGTTTTAGATTTTAAAGG
CCTGACTCCTTATAAAAAGATTATTATAGAGAGTATTGTCATTTCGCTTGGCATTTTACCAATTTTAATCTTTTATTTCG
GAGAATTTCAGCCCTGGTCTATTTTATTGACATTTGTTTTTTCGTTGATTTTCGATATAGTGATGTTACCGGGGCTAACG
ATAATTTTTCTTGTTTCCCCTTTCATAAAACTCACTCAAGTTAATTTTCTATTTGAATGCTTAGAAAGTAGCATTTGCTG
GTTAGCAAGTATGTTTAGCAGACCAGTCGTTCTTGGCAAACCTAATCCACTTTTGCTAATCGCTATGTTGCTTGTATTAG
CTATCTTGTATGATATTCGGCAAAATAAAAAATGGCTGATATTTCTTAGTCTGTTTCTTTCATTACTCTTTTTTGTAGCT
AAATTTCCTTTACAAAATGAAATCACAATGATTGATGTCGGGAAGGGAGATAGTATTTTTATGCGAGACTGGAGAGGGAG
CACTGTATTGATTGATGTTGGCGGACGTGAAGAAATTAGAAAAAAAGAAAGTTGGCAAGAACGTATAAGTAGTTCAAACG
CAGAGAGAACGCTGATTCCATATCTTAAAAGTCGTGGTGTAGATACGATTGATACTTTAGTCTTAACAAATCCAAATTCA
GATTATGCAGGAGATGTATTAGAAGTTGCTAAAAAGTTTTCGATAAAGAAAATTTTTATTTCCAGAAGTAGTTTGAATGA
TGCAGACTTTTTAAATAAATTAAAGGAGACAAGGGCGTTTGTTCATGTCGTAAAACAAGGAGACAAACTTCCTATTTTTG
ATCATCATTTGCAAGTTCTTTCTGGTACGAATAAGAGTGATCAATCGCTAGTTTTATATGGTCAATTTTTTCGTACAAGG
TTTTTATTTATGAGCAATTTAACAGAAGAGGATGAAGTAAAGCTAATGCAACTTTATCCAAAACTAAAAACAGATGTCTT
GAAGGTTGGGCAACATGGATCCCAAAATTCATCAAGTTCTAAGTTCTTACAGCAAGTAAGACCAGTGATTGCCCTCATCT
CTACTGGGAAAAACAATTCATCCAAATCGCTAAGTCAAGAAACAATTGAGCGATTCGATCGGTTAAATACAAAGATCTAT
CGAACAGATAAACAGGGGGCTATTAAGTTTTCGGGTTGGACAACATGGCAATTAGAAACTGTTCAGCAACCATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (216-461)

• Domain of unknown function (DUF4131) (DUF4131) (31-175)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	55.556	100	0.558
comEC/celB	Streptococcus mitis NCTC 12261	55.362	100	0.555
comEC/celB	Streptococcus pneumoniae TIGR4	54.351	100	0.546
comEC/celB	Streptococcus pneumoniae Rx1	53.815	100	0.54
comEC/celB	Streptococcus pneumoniae D39	53.815	100	0.54
comEC/celB	Streptococcus pneumoniae R6	53.815	100	0.54
comEC	Lactococcus lactis subsp. cremoris KW2	46.433	99.866	0.464