Detailed information NTG0892738

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: RYQ61_RS07090
• Genome accession: NZ_CP136799
• Coordinates: 1366980..1368011 (+)
• Length: 343 a.a.
• NCBI ID: WP_102567739.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain XH2169
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1361980..1373011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYQ61_RS07070 (RYQ61_07070)	-	1362712..1364070 (+)	1359	WP_102567741.1	DUF1958 domain-containing protein	-
RYQ61_RS07075 (RYQ61_07075)	-	1364149..1365318 (+)	1170	WP_317289672.1	MFS transporter	-
RYQ61_RS07080 (RYQ61_07080)	-	1365615..1366601 (+)	987	Protein_1349	6-phospho-beta-glucosidase	-
RYQ61_RS07085 (RYQ61_07085)	celB	1366595..1366891 (+)	297	Protein_1350	PTS cellobiose transporter subunit IIC	-
RYQ61_RS07090 (RYQ61_07090)	coiA	1366980..1368011 (+)	1032	WP_102567739.1	competence protein CoiA	Machinery gene
RYQ61_RS07095 (RYQ61_07095)	pepF	1367963..1369765 (+)	1803	WP_102567738.1	oligoendopeptidase F	Regulator
RYQ61_RS07100 (RYQ61_07100)	-	1369767..1370459 (+)	693	WP_117276021.1	O-methyltransferase	-
RYQ61_RS07105 (RYQ61_07105)	prsA	1370557..1371495 (+)	939	WP_003073287.1	peptidylprolyl isomerase PrsA	-
RYQ61_RS07110 (RYQ61_07110)	-	1371720..1372205 (+)	486	WP_117276022.1	LURP-one-related/scramblase family protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 40512.85 Da
• Isoelectric Point: 9.2350

>NTDB_id=892738 RYQ61_RS07090 WP_102567739.1 1366980..1368011(+) (coiA) [Streptococcus intermedius strain XH2169]
MLIACQENGNLLNAVEDTVNPLDKFLCPACLEAVRFKKGRVMRPHFAHISLKDCHFYTENESAEHLNLKAALFTWARKSN
HAVQVEAYLPKLQQIADLLVEKQIALEVQCSSLSQKRLKDRTDSYHHHGYHVLWLLGKKLWLKDSLTNLQKDFLYFSQNM
GFYLWELDDKKQELRLKYLIHEDLHGRAQYKVQSFPFGQGSLLTVLRTPFQRQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKLQAELYQAGDNLLTKTPSDFYPQVHPVCASSFCQIFQDLTPYYQQFSAYYKKAKNKNLQVLYPPIFYAKIFGSIYDR
IEKTEEILWQNKEMKLKKNILGI

Nucleotide

• Length: 1032 bp

>NTDB_id=892738 RYQ61_RS07090 WP_102567739.1 1366980..1368011(+) (coiA) [Streptococcus intermedius strain XH2169]
ATGTTAATAGCTTGTCAGGAAAATGGGAACCTACTAAATGCTGTGGAAGATACAGTAAATCCGCTGGATAAATTTCTCTG
TCCAGCTTGTTTGGAGGCGGTCCGTTTTAAAAAAGGAAGAGTCATGCGACCGCATTTTGCTCATATTTCTTTAAAAGACT
GTCATTTTTATACGGAAAATGAAAGCGCAGAACACTTGAATTTGAAAGCTGCTTTGTTTACTTGGGCCAGAAAGTCTAAT
CATGCAGTTCAAGTGGAAGCGTATTTACCGAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAGATTGCGCTTGA
AGTTCAATGCAGTTCACTGAGTCAAAAGCGCTTAAAAGATCGTACAGACAGTTATCATCACCATGGTTATCATGTTCTTT
GGCTATTAGGAAAGAAACTTTGGCTGAAAGATTCTTTAACTAATTTGCAAAAAGATTTTCTTTATTTCAGTCAAAATATG
GGCTTTTATCTGTGGGAATTGGATGATAAAAAGCAGGAGCTTCGGCTCAAGTATCTGATTCACGAAGATTTGCATGGCCG
AGCTCAATATAAGGTCCAGTCTTTTCCTTTTGGTCAGGGCAGCCTTTTGACTGTTCTGCGAACGCCCTTTCAACGGCAGG
AGATGACCAGTTTTCTAGCAAAAGAGGATAAAAATATTTGCCGTTATGTTCGTCAACAGCTCTATTATCAACAACCTAAA
TGGATGAAATTACAGGCAGAACTGTATCAAGCAGGTGATAATTTATTAACCAAAACGCCTAGTGACTTTTATCCGCAGGT
TCATCCAGTTTGTGCCAGCTCTTTCTGTCAAATTTTTCAAGATCTGACTCCTTATTATCAGCAATTTTCAGCTTATTATA
AAAAAGCAAAAAATAAAAATCTCCAAGTTCTCTATCCGCCAATTTTTTATGCAAAGATTTTTGGTAGTATTTATGATAGA
ATAGAAAAGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (23-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	53.503	91.545	0.49
coiA	Streptococcus mitis NCTC 12261	53.503	91.545	0.49
coiA	Streptococcus pneumoniae Rx1	53.185	91.545	0.487
coiA	Streptococcus pneumoniae D39	53.185	91.545	0.487
coiA	Streptococcus pneumoniae R6	53.185	91.545	0.487
coiA	Lactococcus lactis subsp. cremoris KW2	43.827	94.461	0.414