Detailed information NTG0892505

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R1T46_RS20940
• Genome accession: NZ_CP136693
• Coordinates: 4504213..4505277 (-)
• Length: 354 a.a.
• NCBI ID: WP_317306921.1
• Uniprot ID: -
• Organism: Marinobacter salarius strain CI.11.F.A3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4499213..4510277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R1T46_RS20915 (R1T46_20915)	aroK	4499641..4500207 (-)	567	WP_036203590.1	shikimate kinase AroK	-
R1T46_RS20920 (R1T46_20920)	pilQ	4500338..4502422 (-)	2085	WP_317308347.1	type IV pilus secretin PilQ	Machinery gene
R1T46_RS20925 (R1T46_20925)	-	4502488..4503036 (-)	549	WP_317306919.1	pilus assembly protein PilP	-
R1T46_RS20930 (R1T46_20930)	-	4503039..4503650 (-)	612	WP_007154614.1	type 4a pilus biogenesis protein PilO	-
R1T46_RS20935 (R1T46_20935)	-	4503650..4504213 (-)	564	WP_317306920.1	PilN domain-containing protein	-
R1T46_RS20940 (R1T46_20940)	pilM	4504213..4505277 (-)	1065	WP_317306921.1	pilus assembly protein PilM	Machinery gene
R1T46_RS20945 (R1T46_20945)	-	4505492..4507978 (+)	2487	WP_317306922.1	penicillin-binding protein 1A	-
R1T46_RS20950 (R1T46_20950)	-	4508074..4509339 (-)	1266	WP_317306923.1	malic enzyme-like NAD(P)-binding protein	-
R1T46_RS20955 (R1T46_20955)	rpmE	4509571..4509792 (-)	222	WP_007154619.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38144.18 Da
• Isoelectric Point: 4.1243

>NTDB_id=892505 R1T46_RS20940 WP_317306921.1 4504213..4505277(-) (pilM) [Marinobacter salarius strain CI.11.F.A3]
MFGLLGKKSSSVLGVDISSSSVKLLELSKQGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTSVKQVAV
AVSGSAVITKLIQMDSGLNEFEMEDQITLEADQYIPYPLDEVAIDFEVQGPSETNPDQVDVLLAACRKENVDIREDALEI
GSLTTKIVDVEAYALERAYALIESQLDSQGEELVVAIVDIGATMTTLSVLAEGKTVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYDSEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTAFIQGLTEMVEEKTGTPTLVANP
FADMAVGSRVNASSLSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=892505 R1T46_RS20940 WP_317306921.1 4504213..4505277(-) (pilM) [Marinobacter salarius strain CI.11.F.A3]
GTGTTCGGATTGTTAGGAAAGAAATCCAGTTCGGTGCTGGGCGTGGATATCAGTTCCAGCTCGGTCAAACTACTGGAACT
ATCGAAGCAGGGCGACCGCTATAAGGTCGAGAGCTACGCAGTTGAGCCACTACCGGCCAATGCTGTGGTAGAGAAAAACA
TCACGGATGTCGAGGCGGTGGGCGAGGTGCTCAAGCGTGTCGCATCCAAATCACGTACGAGCGTCAAGCAGGTGGCTGTG
GCGGTCTCTGGTTCCGCCGTTATTACCAAGCTGATCCAGATGGACAGTGGTCTCAACGAGTTTGAGATGGAAGATCAGAT
AACGCTTGAGGCCGATCAGTATATCCCCTATCCGCTGGATGAAGTGGCGATCGACTTCGAGGTTCAGGGGCCGTCTGAGA
CCAACCCGGACCAGGTCGATGTACTTCTTGCGGCGTGCCGGAAAGAAAACGTCGATATTCGGGAAGACGCTCTAGAGATT
GGGTCTTTGACCACCAAGATCGTGGACGTCGAGGCCTATGCACTTGAGCGCGCATACGCACTCATTGAGTCTCAGCTTGA
TTCCCAGGGTGAAGAACTCGTTGTGGCGATCGTCGATATCGGCGCCACCATGACCACACTGAGCGTGTTGGCGGAAGGCA
AGACGGTTTACACTCGCGAGCAGATTTTCGGGGGGAAGCAACTCACCGAAGAAATTCAGCGTCGTTATGGTTTATCCCTT
GAAGAAGCCGGCCTGGCCAAGAAACAGGGCGGTCTTCCGGACGACTACGATTCCGAAGTTCTGACGCCTTTCCGCGAAGC
GGTAGTTCAGCAGGTCGCAAGGGCGCTGCAGTTCTTCTTCGGCGCAAGCCAGTACAATGCGGTTGACTACGTGGTCCTGG
CAGGTGGCACGGCATTTATTCAGGGGCTGACAGAGATGGTCGAGGAAAAAACAGGCACACCAACGCTGGTCGCAAATCCT
TTCGCGGACATGGCGGTGGGGTCAAGAGTGAATGCGTCTTCGCTGAGCAATGATGCACCTTCGCTCATGATCGCCTGCGG
GCTGGCAATGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.39	100	0.534
comM	Acinetobacter nosocomialis M2	53.39	100	0.534
comM	Acinetobacter baylyi ADP1	51.13	100	0.511
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455