Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   RZ534_RS15375 Genome accession   NZ_CP136643
Coordinates   2945774..2948080 (-) Length   768 a.a.
NCBI ID   WP_079920597.1    Uniprot ID   -
Organism   Bacillus altitudinis strain RS1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2940774..2953080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS15335 (RZ534_15335) - 2941180..2941611 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  RZ534_RS15340 (RZ534_15340) - 2941611..2941952 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  RZ534_RS15345 (RZ534_15345) - 2941945..2943423 (+) 1479 WP_265786131.1 Na+/H+ antiporter subunit D -
  RZ534_RS15350 (RZ534_15350) - 2943430..2943909 (+) 480 WP_017358944.1 Na+/H+ antiporter subunit E -
  RZ534_RS15355 (RZ534_15355) - 2943909..2944190 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  RZ534_RS15360 (RZ534_15360) mnhG 2944174..2944548 (+) 375 WP_035701201.1 monovalent cation/H(+) antiporter subunit G -
  RZ534_RS15365 (RZ534_15365) - 2944639..2945028 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  RZ534_RS15370 (RZ534_15370) comA 2945052..2945693 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  RZ534_RS15375 (RZ534_15375) comP 2945774..2948080 (-) 2307 WP_079920597.1 ATP-binding protein Regulator
  RZ534_RS15380 (RZ534_15380) comX 2948094..2948264 (-) 171 WP_017358941.1 competence pheromone ComX -
  RZ534_RS15385 (RZ534_15385) - 2948242..2949165 (-) 924 WP_317327946.1 polyprenyl synthetase family protein -
  RZ534_RS15390 (RZ534_15390) degQ 2949317..2949457 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  RZ534_RS15395 (RZ534_15395) - 2949963..2950316 (+) 354 WP_019744042.1 hypothetical protein -
  RZ534_RS15400 (RZ534_15400) - 2950353..2951579 (-) 1227 WP_058213657.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88569.23 Da        Isoelectric Point: 8.2917

>NTDB_id=892152 RZ534_RS15375 WP_079920597.1 2945774..2948080(-) (comP) [Bacillus altitudinis strain RS1]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSQGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSIFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=892152 RZ534_RS15375 WP_079920597.1 2945774..2948080(-) (comP) [Bacillus altitudinis strain RS1]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCAGGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGTGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAGATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCAACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTCTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTATATTTAAATTCACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGACCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATCGGG
CTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGTGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTTA
AGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAGAAGCAGCGTTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCACAGCTCCTCTATGATTTGGGGTTA
GTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACGGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499