Detailed information NTG0891045

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: RYX39_RS13205
• Genome accession: NZ_CP136430
• Coordinates: 2572477..2573094 (-)
• Length: 205 a.a.
• NCBI ID: WP_216394276.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain Q2H2
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2567477..2578094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYX39_RS13175 (RYX39_13175)	rpsT	2567780..2568046 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
RYX39_RS13180 (RYX39_13180)	holA	2568061..2569104 (-)	1044	WP_024122110.1	DNA polymerase III subunit delta	-
RYX39_RS13185 (RYX39_13185)	-	2569144..2569293 (-)	150	WP_003229985.1	hypothetical protein	-
RYX39_RS13190 (RYX39_13190)	-	2569334..2569468 (+)	135	WP_010335005.1	YqzM family protein	-
RYX39_RS13195 (RYX39_13195)	comEC	2569507..2571837 (-)	2331	WP_255003797.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RYX39_RS13200 (RYX39_13200)	-	2571841..2572410 (-)	570	WP_010335007.1	ComE operon protein 2	-
RYX39_RS13205 (RYX39_13205)	comEA	2572477..2573094 (-)	618	WP_216394276.1	helix-hairpin-helix domain-containing protein	Machinery gene
RYX39_RS13210 (RYX39_13210)	comER	2573178..2573999 (+)	822	WP_024122113.1	late competence protein ComER	-
RYX39_RS13215 (RYX39_13215)	-	2574064..2574807 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
RYX39_RS13220 (RYX39_13220)	rsfS	2574804..2575160 (-)	357	WP_024122115.1	ribosome silencing factor	-
RYX39_RS13225 (RYX39_13225)	yqeK	2575178..2575738 (-)	561	WP_095713321.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RYX39_RS13230 (RYX39_13230)	-	2575728..2576297 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
RYX39_RS13235 (RYX39_13235)	yhbY	2576308..2576598 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
RYX39_RS13240 (RYX39_13240)	aroE	2576598..2577434 (-)	837	WP_038954228.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22046.83 Da
• Isoelectric Point: 4.6821

>NTDB_id=891045 RYX39_RS13205 WP_216394276.1 2572477..2573094(-) (comEA) [Bacillus halotolerans strain Q2H2]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSEGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=891045 RYX39_RS13205 WP_216394276.1 2572477..2573094(-) (comEA) [Bacillus halotolerans strain Q2H2]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTAAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTACATACCGAGTGAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGACCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	76.699	100	0.771
comEA	Staphylococcus aureus MW2	37.273	100	0.4
comEA	Staphylococcus aureus N315	36.937	100	0.4
comEA	Streptococcus thermophilus LMD-9	36.792	100	0.38
comEA	Latilactobacillus sakei subsp. sakei 23K	35.321	100	0.376