Detailed information NTG0891043

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RYX39_RS13195
• Genome accession: NZ_CP136430
• Coordinates: 2569507..2571837 (-)
• Length: 776 a.a.
• NCBI ID: WP_255003797.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain Q2H2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2564507..2576837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYX39_RS13160 (RYX39_13160)	-	2564847..2565185 (-)	339	WP_101864551.1	YqxA family protein	-
RYX39_RS13165 (RYX39_13165)	spoIIP	2565202..2566407 (-)	1206	WP_044154491.1	spore autolysin SpoIIP	-
RYX39_RS13170 (RYX39_13170)	gpr	2566470..2567576 (-)	1107	WP_044154490.1	GPR endopeptidase	-
RYX39_RS13175 (RYX39_13175)	rpsT	2567780..2568046 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
RYX39_RS13180 (RYX39_13180)	holA	2568061..2569104 (-)	1044	WP_024122110.1	DNA polymerase III subunit delta	-
RYX39_RS13185 (RYX39_13185)	-	2569144..2569293 (-)	150	WP_003229985.1	hypothetical protein	-
RYX39_RS13190 (RYX39_13190)	-	2569334..2569468 (+)	135	WP_010335005.1	YqzM family protein	-
RYX39_RS13195 (RYX39_13195)	comEC	2569507..2571837 (-)	2331	WP_255003797.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RYX39_RS13200 (RYX39_13200)	-	2571841..2572410 (-)	570	WP_010335007.1	ComE operon protein 2	-
RYX39_RS13205 (RYX39_13205)	comEA	2572477..2573094 (-)	618	WP_216394276.1	helix-hairpin-helix domain-containing protein	Machinery gene
RYX39_RS13210 (RYX39_13210)	comER	2573178..2573999 (+)	822	WP_024122113.1	late competence protein ComER	-
RYX39_RS13215 (RYX39_13215)	-	2574064..2574807 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
RYX39_RS13220 (RYX39_13220)	rsfS	2574804..2575160 (-)	357	WP_024122115.1	ribosome silencing factor	-
RYX39_RS13225 (RYX39_13225)	yqeK	2575178..2575738 (-)	561	WP_095713321.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RYX39_RS13230 (RYX39_13230)	-	2575728..2576297 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
RYX39_RS13235 (RYX39_13235)	yhbY	2576308..2576598 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86219.52 Da
• Isoelectric Point: 7.8330

>NTDB_id=891043 RYX39_RS13195 WP_255003797.1 2569507..2571837(-) (comEC) [Bacillus halotolerans strain Q2H2]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLFLLIVSIKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQGSYHF
KEVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELIGTLEKPKQATVPGTFDYQQYLYRQHI
HWSYSVTSIGNCSEPSGVRYKLLGLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSASVGQFLFYWFDVMMTWINRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFPRLTVSTG
LFCATLILLFVSPYVSSEGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKLHKVKRLIIPKGFVSEPHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGRISWLLTGDLEKEGEQEVIDVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKSGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2331 bp

>NTDB_id=891043 RYX39_RS13195 WP_255003797.1 2569507..2571837(-) (comEC) [Bacillus halotolerans strain Q2H2]
ATGCGGAATTCGCGTCTATTGTTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTTTCTTCTTATTGTGTCAATCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTCAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGCAGCTATCACTTC
AAGGAGGTCATTCACAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
TTGGTACTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTATCGGCAGCATATT
CATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGGTGTCCGGTATAAGCTTCTCGGTTTGAGAAA
ATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTAGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGGATTTTGACAGCAGGCCTATTTTACGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCTTCTGTTCTCCGAGCCGCTCTGATGTCCGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCGTCTATTTTTCAGCA
TATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATCATTAGCATTCCGATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAGCGTCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GATCAACAGACTGATCACTAAAATCGCTGATATAGAAATATTCACAATCATCATCTCTCGCCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCCCCGGCTGACAGTGTCCACAGGC
CTTTTTTGTGCAACGCTTATCCTGCTCTTTGTTTCCCCTTATGTTAGTTCCGAGGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGTGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAGCTTGATGCGCTGATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCTTCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCTGAACCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGTGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGATCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCGATGTGTTCCCAAATATAAAAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATCCATTCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAGCGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.51	100	0.795