Detailed information NTG0887791

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RUL31_RS02155
• Genome accession: NZ_CP135964
• Coordinates: 439801..440949 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain CD303
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 434801..445949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUL31_RS02135 (RUL31_02135)	-	435125..435805 (-)	681	WP_106273036.1	ABC transporter ATP-binding protein	-
RUL31_RS02140 (RUL31_02140)	-	435823..437301 (-)	1479	WP_315916374.1	ABC transporter permease	-
RUL31_RS02145 (RUL31_02145)	-	437516..438202 (+)	687	WP_106045683.1	response regulator transcription factor	-
RUL31_RS02150 (RUL31_02150)	-	438189..439607 (+)	1419	WP_315916375.1	HAMP domain-containing sensor histidine kinase	-
RUL31_RS02155 (RUL31_02155)	rapC	439801..440949 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
RUL31_RS02160 (RUL31_02160)	phrC	440933..441052 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
RUL31_RS02165 (RUL31_02165)	-	441187..441294 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
RUL31_RS02170 (RUL31_02170)	-	441498..441581 (-)	84	WP_370499808.1	YjcZ family sporulation protein	-
RUL31_RS02175 (RUL31_02175)	-	441712..443076 (-)	1365	WP_315916376.1	aspartate kinase	-
RUL31_RS02180 (RUL31_02180)	ceuB	443506..444456 (+)	951	WP_010789705.1	ABC transporter permease	Machinery gene
RUL31_RS02185 (RUL31_02185)	-	444449..445396 (+)	948	WP_106045687.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=887791 RUL31_RS02155 WP_004430265.1 439801..440949(+) (rapC) [Bacillus atrophaeus strain CD303]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=887791 RUL31_RS02155 WP_004430265.1 439801..440949(+) (rapC) [Bacillus atrophaeus strain CD303]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCCCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571