Detailed information NTG0886556

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: RRU92_RS07745
• Genome accession: NZ_CP135436
• Coordinates: 1606528..1607484 (-)
• Length: 318 a.a.
• NCBI ID: WP_315639226.1
• Uniprot ID: A0AA96ML20
• Organism: Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1599910..1608725	1606528..1607484	within	0

Gene organization within MGE regions

Location: 1599910..1608725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RRU92_RS07715 (RRU92_07715)	tnpA	1599910..1600374 (+)	465	WP_315639220.1	IS200/IS605 family transposase	-
RRU92_RS07720 (RRU92_07720)	prsA	1600516..1601457 (-)	942	WP_000728085.1	peptidylprolyl isomerase PrsA	-
RRU92_RS07725 (RRU92_07725)	-	1601648..1603012 (-)	1365	WP_315639222.1	LPXTG cell wall anchor domain-containing protein	-
RRU92_RS07730 (RRU92_07730)	-	1603316..1603939 (-)	624	WP_315639223.1	recombinase family protein	-
RRU92_RS07735 (RRU92_07735)	-	1603988..1604701 (-)	714	WP_315639224.1	O-methyltransferase	-
RRU92_RS07740 (RRU92_07740)	pepF	1604707..1606509 (-)	1803	WP_315639225.1	oligoendopeptidase F	Regulator
RRU92_RS07745 (RRU92_07745)	coiA	1606528..1607484 (-)	957	WP_315639226.1	competence protein CoiA	Machinery gene
RRU92_RS07750 (RRU92_07750)	-	1607577..1608725 (-)	1149	WP_315639228.1	hypothetical protein	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 37982.61 Da
• Isoelectric Point: 8.6637

>NTDB_id=886556 RRU92_RS07745 WP_315639226.1 1606528..1607484(-) (coiA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MFLARDEKGSLVNALEDKLVKQSYTCPACGALLRLRKGKNLRTHFAHVSLKQCDFYYENESLEHLENKVALFNWAMKNDK
AELECPIPQLKQIADILVNKQLALEVQCSSISRQLLEERSLGYRKNGYQVLWLVGQKLWLKERLTHLQRDLLSFSQNMGF
HLWELDQQRDILRLKYMIHQDLKGNLYYQIREFPYGQGNLIEILRLPYQKQRIASMDVSQDETICDYIRQQLYYKNPYWM
RKQGEAYAQGKNLLNLDVQDWFPQVRPIENGRFCQITIDLQDYYDNFQAYYQQNPKTDTQKLYPPAFYQQYFLKNVVK

Nucleotide

• Length: 957 bp

>NTDB_id=886556 RRU92_RS07745 WP_315639226.1 1606528..1607484(-) (coiA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGTTTTTAGCCAGAGATGAAAAAGGAAGCTTAGTCAATGCCTTGGAGGATAAATTAGTCAAACAGAGCTATACTTGTCC
AGCTTGTGGAGCTTTGCTTCGATTAAGAAAAGGGAAGAACCTACGGACGCATTTTGCCCATGTATCGCTCAAACAGTGTG
ATTTTTACTACGAAAATGAGAGTCTAGAGCATCTGGAAAATAAGGTTGCCCTTTTTAATTGGGCTATGAAAAATGACAAG
GCCGAGCTTGAATGTCCCATTCCCCAACTAAAACAAATTGCAGATATTTTAGTCAATAAACAGCTTGCCTTAGAAGTTCA
GTGTAGTTCTATTTCTCGCCAACTTTTGGAGGAAAGAAGTCTGGGCTATCGAAAAAATGGCTACCAAGTACTTTGGCTAG
TAGGTCAAAAACTTTGGTTAAAGGAACGTTTGACTCACCTCCAAAGAGACCTGCTTTCCTTTAGTCAAAATATGGGCTTT
CATCTATGGGAATTAGATCAGCAAAGGGACATACTTCGCTTGAAATACATGATCCATCAAGATTTGAAGGGGAATCTTTA
TTATCAAATAAGGGAGTTTCCTTATGGGCAAGGCAATCTCATAGAGATTTTACGGCTTCCCTATCAGAAGCAAAGAATAG
CAAGTATGGATGTATCACAAGATGAAACAATTTGCGACTACATTCGCCAACAACTTTACTATAAAAATCCTTACTGGATG
AGGAAACAGGGGGAGGCTTATGCTCAGGGAAAGAATCTACTGAATTTGGATGTTCAAGATTGGTTTCCCCAAGTAAGGCC
TATAGAAAATGGTCGATTTTGCCAGATAACTATAGATTTGCAGGACTATTACGACAATTTTCAGGCTTATTATCAACAAA
ATCCCAAAACTGATACACAAAAGCTCTATCCCCCAGCTTTTTATCAGCAATATTTCTTAAAAAATGTGGTAAAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (18-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	63.836	100	0.638
coiA	Streptococcus pneumoniae Rx1	63.522	100	0.635
coiA	Streptococcus pneumoniae D39	63.522	100	0.635
coiA	Streptococcus pneumoniae R6	63.522	100	0.635
coiA	Streptococcus pneumoniae TIGR4	63.208	100	0.632
coiA	Lactococcus lactis subsp. cremoris KW2	40.994	100	0.415