Detailed information NTG0885493

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RO839_RS02355
• Genome accession: NZ_CP135132
• Coordinates: 549983..551503 (+)
• Length: 506 a.a.
• NCBI ID: WP_057682850.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain CO33
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 544983..556503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RO839_RS02325 (RO839_02325)	rpsM	545804..546160 (+)	357	WP_057682852.1	30S ribosomal protein S13	-
RO839_RS02330 (RO839_02330)	rpsK	546176..546568 (+)	393	WP_004090135.1	30S ribosomal protein S11	-
RO839_RS02335 (RO839_02335)	rpsD	546583..547209 (+)	627	WP_057682851.1	30S ribosomal protein S4	-
RO839_RS02340 (RO839_02340)	rpoA	547264..548262 (+)	999	WP_004090142.1	DNA-directed RNA polymerase subunit alpha	-
RO839_RS02345 (RO839_02345)	rplQ	548394..548774 (+)	381	WP_020852432.1	50S ribosomal protein L17	-
RO839_RS02350 (RO839_02350)	-	549712..549972 (+)	261	WP_004086547.1	accessory factor UbiK family protein	-
RO839_RS02355 (RO839_02355)	comM	549983..551503 (+)	1521	WP_057682850.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
RO839_RS02360 (RO839_02360)	-	554104..554715 (+)	612	WP_316665807.1	alpha/beta fold hydrolase	-
RO839_RS02365 (RO839_02365)	-	554712..554984 (+)	273	WP_235443659.1	hypothetical protein	-
RO839_RS02370 (RO839_02370)	-	554985..556037 (+)	1053	Protein_449	lipase secretion chaperone	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 54605.75 Da
• Isoelectric Point: 8.0783

>NTDB_id=885493 RO839_RS02355 WP_057682850.1 549983..551503(+) (comM) [Xylella fastidiosa strain CO33]
MSLALVHSRARAGVFAPSVRVEVHLSGGLPATQIVGLPEAAVRESRDRVRAALLCACFEYPARRITINLAPADLPKEGGR
FDLPIALGILAASGQLPLDALAGKEFLGELALTGELRSVDSVLPAALAASQAGHWLVIPESNGAEAAIAGCCEAYTARTL
LEVCAGLCGKTLLLAAQRFEVKADVLHDIPDISDVRGQEEARRVLEIAAAGGHHLLLIGSPGCGKTLLASRLPGLLPPAS
EQEALESASIASVSGHDLNLTHWRRRPYRAPHHSASAVALIGGGVHARPGEISLAHNGVLFMDELPEWQRKTLEALREPM
ESGIVTIARATRSVDYPARFQLVAAMNPCPCGWAGDSSGRCQCGLDAIRRYRRRISGPLLDRIDLQLEIPRLAPQLLRPS
TPRGEHSVTVRRRVTDSRALQYNRQAELNAHLGQAATERHCCLDATDQRLLERAIEQLQLSARSMQRILRVARTIADLDG
STLITSMHLHEAIGYRRFDRTAFGIA

Nucleotide

• Length: 1521 bp

>NTDB_id=885493 RO839_RS02355 WP_057682850.1 549983..551503(+) (comM) [Xylella fastidiosa strain CO33]
ATGAGCTTGGCTTTGGTGCATAGCCGTGCCCGTGCTGGAGTTTTTGCACCCTCAGTTAGGGTTGAAGTACATTTGTCGGG
TGGCCTGCCTGCAACACAGATCGTTGGTTTGCCTGAGGCTGCTGTACGTGAATCTCGAGATCGAGTGCGTGCCGCGTTAT
TGTGTGCTTGCTTTGAATATCCGGCCCGACGTATCACCATTAATTTGGCGCCTGCTGACTTACCGAAGGAGGGCGGGCGC
TTTGATTTGCCGATTGCATTAGGAATCTTGGCCGCCAGCGGTCAATTGCCACTCGATGCTTTAGCAGGTAAGGAGTTCCT
CGGTGAACTTGCACTCACTGGAGAACTGCGTTCGGTTGACAGTGTGCTACCTGCGGCTTTAGCTGCATCACAGGCAGGAC
ACTGGCTGGTGATACCAGAAAGTAATGGTGCTGAAGCAGCAATCGCAGGGTGTTGTGAAGCTTATACTGCTCGCACTCTA
CTTGAGGTTTGTGCTGGCTTGTGCGGTAAAACATTATTGCTGGCTGCTCAGAGATTCGAAGTTAAGGCTGATGTATTGCA
TGATATTCCTGATATTTCTGACGTGCGCGGCCAAGAGGAGGCACGCCGTGTTCTTGAAATTGCTGCGGCTGGTGGACATC
ATTTGTTGCTGATTGGTAGTCCTGGTTGTGGTAAAACTCTTTTAGCCTCAAGATTGCCAGGCTTATTACCGCCAGCAAGC
GAGCAAGAAGCATTGGAGAGTGCGTCGATTGCCTCGGTGAGTGGGCATGATTTGAATCTGACTCATTGGCGACGACGTCC
CTATCGTGCTCCGCATCATAGTGCTAGCGCAGTTGCACTGATCGGTGGTGGGGTACATGCACGTCCTGGTGAGATCTCGC
TCGCGCATAATGGCGTGCTATTTATGGATGAATTGCCCGAATGGCAACGCAAAACCTTGGAAGCCTTACGTGAACCCATG
GAATCTGGTATAGTGACGATTGCTCGTGCCACACGTAGTGTGGATTATCCTGCCCGTTTTCAGTTAGTAGCTGCTATGAA
TCCTTGCCCTTGTGGTTGGGCAGGTGATTCGAGTGGACGTTGTCAATGTGGTTTGGATGCAATTCGACGTTATCGTCGCC
GTATTTCTGGTCCGTTATTGGACCGCATTGATCTACAGTTGGAAATACCACGGTTGGCACCGCAGCTACTGCGTCCTAGT
ACACCGCGTGGTGAACATAGTGTTACAGTGCGGAGGCGTGTTACTGATTCCAGGGCTTTGCAATATAATCGACAAGCGGA
GCTTAATGCGCATCTGGGCCAAGCCGCAACCGAGCGTCATTGCTGTTTGGATGCGACCGACCAGCGGTTGCTGGAACGCG
CGATCGAACAGTTGCAGCTATCGGCACGTTCAATGCAACGGATTCTACGCGTGGCACGCACGATTGCTGATTTGGATGGT
AGCACATTAATCACCAGCATGCATTTGCATGAAGCGATCGGGTATCGTCGATTTGACCGTACAGCCTTTGGCATTGCTTA
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-393)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.8	98.814	0.532
comM	Vibrio campbellii strain DS40M4	53.6	98.814	0.53
comM	Haemophilus influenzae Rd KW20	52.183	99.605	0.52
comM	Glaesserella parasuis strain SC1401	51.881	99.802	0.518
comM	Legionella pneumophila str. Paris	50	98.814	0.494
comM	Legionella pneumophila strain ERS1305867	50	98.814	0.494
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.301	100	0.441