Detailed information NTG0088486

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: OCUAc17_RS01575
• Genome accession: NZ_AP024798
• Coordinates: 333671..334729 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain OCU Ac17
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 328671..339729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCUAc17_RS01560 (OCUAc17_02970)	-	329732..330064 (+)	333	WP_005804527.1	hypothetical protein	-
OCUAc17_RS01565 (OCUAc17_02980)	rrmA	330067..330891 (+)	825	WP_005078486.1	putative RNA methyltransferase	-
OCUAc17_RS01570 (OCUAc17_02990)	ponA	330948..333509 (-)	2562	WP_005804528.1	penicillin-binding protein PBP1a	-
OCUAc17_RS01575 (OCUAc17_03000)	pilM	333671..334729 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
OCUAc17_RS01580 (OCUAc17_03010)	pilN	334729..335370 (+)	642	WP_005804530.1	PilN domain-containing protein	Machinery gene
OCUAc17_RS01585 (OCUAc17_03020)	pilO	335367..336146 (+)	780	WP_005804531.1	type 4a pilus biogenesis protein PilO	Machinery gene
OCUAc17_RS01590 (OCUAc17_03030)	pilP	336158..336685 (+)	528	WP_005804532.1	pilus assembly protein PilP	Machinery gene
OCUAc17_RS01595 (OCUAc17_03040)	pilQ	336748..338913 (+)	2166	WP_002116833.1	type IV pilus secretin PilQ	Machinery gene
OCUAc17_RS01600 (OCUAc17_03050)	aroK	338925..339494 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=88486 OCUAc17_RS01575 WP_005067078.1 333671..334729(+) (pilM) [Acinetobacter pittii strain OCU Ac17]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=88486 OCUAc17_RS01575 WP_005067078.1 333671..334729(+) (pilM) [Acinetobacter pittii strain OCU Ac17]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAGAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42