Detailed information NTG0884731

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: RMQ62_RS05435
• Genome accession: NZ_CP135065
• Coordinates: 1116561..1117460 (-)
• Length: 299 a.a.
• NCBI ID: WP_015646238.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID24665
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1111561..1122460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ62_RS05425 (RMQ62_05425)	-	1113419..1114942 (-)	1524	WP_313680567.1	quinol oxidase	-
RMQ62_RS05430 (RMQ62_05430)	-	1115133..1116353 (-)	1221	WP_313680566.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
RMQ62_RS05435 (RMQ62_05435)	comR	1116561..1117460 (-)	900	WP_015646238.1	helix-turn-helix domain-containing protein	Regulator
RMQ62_RS05440 (RMQ62_05440)	-	1117565..1118188 (-)	624	WP_024414287.1	HAD-IA family hydrolase	-
RMQ62_RS05445 (RMQ62_05445)	ruvB	1118256..1119257 (-)	1002	WP_004195448.1	Holliday junction branch migration DNA helicase RuvB	-
RMQ62_RS05450 (RMQ62_05450)	-	1119385..1120044 (+)	660	WP_044677125.1	amino acid ABC transporter permease	-
RMQ62_RS05455 (RMQ62_05455)	-	1120025..1120702 (+)	678	WP_044677097.1	amino acid ABC transporter permease	-
RMQ62_RS05460 (RMQ62_05460)	-	1120707..1121453 (+)	747	WP_044677099.1	amino acid ABC transporter ATP-binding protein	-
RMQ62_RS05465 (RMQ62_05465)	-	1121467..1122336 (+)	870	WP_313680565.1	cysteine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35175.03 Da
• Isoelectric Point: 4.5398

>NTDB_id=884731 RMQ62_RS05435 WP_015646238.1 1116561..1117460(-) (comR) [Streptococcus suis strain ID24665]
MNDKEFGQRVRQLRENASLTREQFCDDELELSVRQLTRIEAGTSKPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLK
FDVLRTPTYGNEELVEKRDAIMTEIYDDYYDDLPEEEKIAIDAIQSRIDTLESGTAGFGKEILEDYFEQIFRKQKYEVND
LLIIRLQLEYVRLSSSDSEIFGQFLKIIEYLHGQIDIINSSDLFVLRDTLLSCVNILGSKKYYEPIPKIFDSVDKIIQST
QDFQKKPIVSVLKWKYALFVNKDRGEAEKHYLDAMLFAKLIENRELEQKIEEDWKVDNQ

Nucleotide

• Length: 900 bp

>NTDB_id=884731 RMQ62_RS05435 WP_015646238.1 1116561..1117460(-) (comR) [Streptococcus suis strain ID24665]
ATGAACGATAAGGAATTTGGACAACGTGTACGTCAACTTCGAGAAAACGCTAGTCTGACACGTGAACAGTTTTGCGATGA
CGAACTTGAGCTCTCCGTCCGCCAATTAACCCGTATCGAAGCAGGTACTTCTAAGCCGACTTTTTCAAAAATCCAATATA
TCGCAACCCGCTTAGGCATGGGGCTCTATGAGCTTATGCCTGATTATGTATCCTTGCCAGAAAGATACTCCAAGCTGAAA
TTTGATGTCCTCCGTACACCGACTTATGGTAATGAGGAATTAGTTGAAAAACGTGATGCTATCATGACGGAAATCTATGA
TGATTATTACGACGACTTGCCTGAGGAGGAGAAAATAGCGATTGATGCCATTCAATCCCGAATTGATACCTTAGAGTCAG
GGACAGCAGGCTTTGGAAAAGAGATACTGGAAGATTACTTTGAACAAATTTTCCGAAAACAAAAGTACGAAGTGAATGAT
TTGCTGATTATTAGGCTCCAGCTTGAATACGTTAGATTGTCCAGTAGTGACTCAGAAATATTTGGACAGTTTTTGAAAAT
TATAGAATATTTACATGGACAAATTGATATTATCAATTCAAGTGATTTATTTGTTCTAAGAGATACATTGTTATCTTGTG
TAAACATTTTGGGAAGTAAAAAATATTATGAACCAATACCAAAGATATTCGACAGTGTAGATAAAATTATACAGTCAACG
CAAGATTTTCAGAAAAAGCCAATTGTCAGTGTGTTGAAATGGAAGTATGCACTTTTTGTAAATAAGGATAGAGGTGAGGC
TGAAAAGCATTATCTAGATGCGATGCTATTTGCAAAATTGATAGAAAATAGAGAGTTAGAGCAGAAGATTGAAGAAGATT
GGAAAGTTGACAATCAATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix domain (HTH_31) (5-60)

• ComR tetratricopeptide (ComR_TPR) (73-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	92.977	100	0.93
comR	Streptococcus suis 05ZYH33	92.977	100	0.93
comR	Streptococcus suis D9	59.801	100	0.602
comR	Streptococcus mutans UA159	45.151	100	0.452
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	37.801	97.324	0.368
comR	Streptococcus pyogenes MGAS315	37.037	99.331	0.368