Detailed information NTG0883413

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: QTM01_RS01495
• Genome accession: NZ_CP134769
• Coordinates: 315097..317247 (+)
• Length: 716 a.a.
• NCBI ID: WP_311864123.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain SYBC-SM2
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 310097..322247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTM01_RS01465 (QTM01_01465)	-	310759..311151 (+)	393	Protein_292	SDR family NAD(P)-dependent oxidoreductase	-
QTM01_RS01470 (QTM01_01470)	-	311341..312116 (+)	776	WP_086989537.1	IS5-like element ISLpl3 family transposase	-
QTM01_RS01475 (QTM01_01475)	-	312131..313273 (+)	1143	Protein_294	IS256 family transposase	-
QTM01_RS01480 (QTM01_01480)	plnF	313427..313585 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
QTM01_RS01485 (QTM01_01485)	plnE	313610..313780 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
QTM01_RS01490 (QTM01_01490)	-	313956..314879 (+)	924	WP_311864567.1	IS30 family transposase	-
QTM01_RS01495 (QTM01_01495)	comA	315097..317247 (+)	2151	WP_311864123.1	peptide cleavage/export ABC transporter	Regulator
QTM01_RS01500 (QTM01_01500)	-	317263..318639 (+)	1377	WP_062688861.1	HlyD family secretion protein	-
QTM01_RS01505 (QTM01_01505)	-	318729..318902 (+)	174	WP_234369350.1	hypothetical protein	-
QTM01_RS01510 (QTM01_01510)	-	318948..319418 (+)	471	WP_232539265.1	CPBP family intramembrane glutamic endopeptidase	-
QTM01_RS01515 (QTM01_01515)	-	319486..320154 (+)	669	WP_027821499.1	CPBP family intramembrane glutamic endopeptidase	-
QTM01_RS01520 (QTM01_01520)	-	320241..320921 (+)	681	WP_053339247.1	CPBP family intramembrane glutamic endopeptidase	-
QTM01_RS01525 (QTM01_01525)	-	321015..321701 (+)	687	WP_027821497.1	CPBP family intramembrane glutamic endopeptidase	-
QTM01_RS01530 (QTM01_01530)	-	321839..322042 (+)	204	WP_311864127.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79937.69 Da
• Isoelectric Point: 6.8590

>NTDB_id=883413 QTM01_RS01495 WP_311864123.1 315097..317247(+) (comA) [Lactiplantibacillus plantarum strain SYBC-SM2]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVGIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGKIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=883413 QTM01_RS01495 WP_311864123.1 315097..317247(+) (comA) [Lactiplantibacillus plantarum strain SYBC-SM2]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCTGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGGCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGAAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.766	99.581	0.585
comA	Streptococcus pneumoniae Rx1	58.485	99.581	0.582
comA	Streptococcus pneumoniae D39	58.485	99.581	0.582
comA	Streptococcus pneumoniae R6	58.485	99.581	0.582
comA	Streptococcus pneumoniae TIGR4	58.345	99.581	0.581
comA	Streptococcus mitis SK321	58.205	99.581	0.58
comA	Streptococcus gordonii str. Challis substr. CH1	56.964	100	0.571
comA/nlmT	Streptococcus mutans UA159	54.457	100	0.546