Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RIL74_RS24095 | Genome accession | NZ_CP134638 |
| Coordinates | 4829313..4829840 (+) | Length | 175 a.a. |
| NCBI ID | WP_020882840.1 | Uniprot ID | A0A839BRA2 |
| Organism | Enterobacter ludwigii strain 09A:C | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4824313..4834840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIL74_RS24075 (RIL74_24075) | aphA | 4824636..4825349 (+) | 714 | WP_014168217.1 | acid phosphatase AphA | - |
| RIL74_RS24080 (RIL74_24080) | - | 4825463..4825879 (+) | 417 | WP_014168218.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| RIL74_RS24085 (RIL74_24085) | - | 4825882..4826235 (+) | 354 | WP_014168219.1 | MmcQ/YjbR family DNA-binding protein | - |
| RIL74_RS24090 (RIL74_24090) | uvrA | 4826239..4829061 (-) | 2823 | WP_014168220.1 | excinuclease ABC subunit UvrA | - |
| RIL74_RS24095 (RIL74_24095) | ssb | 4829313..4829840 (+) | 528 | WP_020882840.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| RIL74_RS24100 (RIL74_24100) | - | 4829904..4830185 (-) | 282 | WP_020882839.1 | YjcB family protein | - |
| RIL74_RS24105 (RIL74_24105) | - | 4830675..4832075 (+) | 1401 | WP_032681915.1 | sensor domain-containing diguanylate cyclase | - |
| RIL74_RS24110 (RIL74_24110) | - | 4832415..4833980 (+) | 1566 | WP_063925905.1 | EAL domain-containing protein | - |
| RIL74_RS24115 (RIL74_24115) | soxS | 4833987..4834313 (-) | 327 | WP_013095071.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18705.74 Da Isoelectric Point: 5.2456
>NTDB_id=882553 RIL74_RS24095 WP_020882840.1 4829313..4829840(+) (ssb) [Enterobacter ludwigii strain 09A:C]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=882553 RIL74_RS24095 WP_020882840.1 4829313..4829840(+) (ssb) [Enterobacter ludwigii strain 09A:C]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
56.522 |
100 |
0.594 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.474 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.474 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.366 |