Detailed information NTG0880357

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: RJW51_RS02535
• Genome accession: NZ_CP134491
• Coordinates: 505149..506087 (-)
• Length: 312 a.a.
• NCBI ID: WP_172090133.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 1628469
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 500149..511087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW51_RS02510 (RJW51_02500)	prsA	500397..501413 (-)	1017	WP_024391865.1	peptidylprolyl isomerase PrsA	-
RJW51_RS02515 (RJW51_02505)	-	501476..502195 (-)	720	WP_172090129.1	class I SAM-dependent methyltransferase	-
RJW51_RS02520 (RJW51_02510)	-	502265..502816 (-)	552	WP_172090130.1	DUF6630 family protein	-
RJW51_RS02525 (RJW51_02515)	-	502829..503272 (-)	444	WP_172090131.1	hypothetical protein	-
RJW51_RS02530 (RJW51_02520)	pepF	503274..505076 (-)	1803	WP_172090132.1	oligoendopeptidase F	Regulator
RJW51_RS02535 (RJW51_02525)	coiA	505149..506087 (-)	939	WP_172090133.1	competence protein CoiA family protein	Machinery gene
RJW51_RS02540 (RJW51_02530)	metG	506148..508151 (-)	2004	WP_172090134.1	methionine--tRNA ligase	-
RJW51_RS02545 (RJW51_02535)	-	508307..508900 (+)	594	WP_172090135.1	DUF1361 domain-containing protein	-
RJW51_RS02550 (RJW51_02540)	-	508944..509114 (-)	171	WP_397610493.1	hypothetical protein	-
RJW51_RS02555 (RJW51_02545)	-	509149..509469 (-)	321	WP_397610494.1	hypothetical protein	-
RJW51_RS02560 (RJW51_02550)	-	509466..510230 (-)	765	WP_172090136.1	replication initiator protein A	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 36296.08 Da
• Isoelectric Point: 8.4547

>NTDB_id=880357 RJW51_RS02535 WP_172090133.1 505149..506087(-) (coiA) [Streptococcus parasuis strain 1628469]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYRWLVNAER
VELEKCLPSIGQIADLFVNDRLVLEVQCSSLPISRLQLRTQAYREAGYQVLWLLGKDLWLKERLTNLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQILSSMTCPMDEDLPHYIAQQLYFKSPKWL
ALQAEAYGRGENLLTKTALDWFPHIRLPRSAIGFAQIQVNLNSVYQDFDGYYIRVKDKRNQVLYPPVIYLKK

Nucleotide

• Length: 939 bp

>NTDB_id=880357 RJW51_RS02535 WP_172090133.1 505149..506087(-) (coiA) [Streptococcus parasuis strain 1628469]
ATGTTAGTTGCACTTGATGAAGATGGGCAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGCCTGGTTCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTCACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCTGCACAGCATCTGTCCCTCAAGTCTTGTCTGTACAGGTGGTTAGTCAATGCTGAACGA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGTCAGATAGCGGACTTATTTGTCAATGATCGTTTAGTCTTGGAAGTCCA
ATGTTCTAGTCTGCCGATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCGTGAGGCTGGTTATCAGGTTCTTTGGTTGC
TTGGTAAGGATTTGTGGCTCAAGGAACGACTGACTAATTTGCACAAGCAATTTCTCTCTTTTAGTATGAATATGGGGTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGGCTCCGTTACCTTATTCATGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTAGACATCTTGCGTCTGCCCTTTGCAAAGCAAATTCTAT
CTAGCATGACTTGTCCAATGGATGAAGATTTGCCTCACTACATTGCACAACAGCTTTATTTCAAATCTCCCAAATGGCTC
GCCCTGCAAGCAGAGGCTTATGGACGTGGAGAAAATCTACTGACCAAGACAGCATTAGACTGGTTTCCCCACATCCGACT
GCCCCGCTCTGCCATTGGCTTTGCCCAGATACAGGTAAATTTGAACTCGGTTTACCAGGACTTTGATGGCTATTATATTA
GGGTTAAAGACAAGAGAAATCAAGTCCTTTATCCACCGGTTATTTACCTTAAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-235)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	52.903	99.359	0.526
coiA	Streptococcus pneumoniae TIGR4	50.968	99.359	0.506
coiA	Streptococcus pneumoniae Rx1	50.968	99.359	0.506
coiA	Streptococcus pneumoniae D39	50.968	99.359	0.506
coiA	Streptococcus pneumoniae R6	50.968	99.359	0.506
coiA	Lactococcus lactis subsp. cremoris KW2	42.188	100	0.433