Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   RIN70_RS02790 Genome accession   NZ_CP134147
Coordinates   540261..542132 (+) Length   623 a.a.
NCBI ID   WP_129824774.1    Uniprot ID   -
Organism   Streptococcus parasanguinis strain 30.8.10     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 535261..547132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIN70_RS02775 (RIN70_02775) fmt 537264..538199 (+) 936 WP_070448998.1 methionyl-tRNA formyltransferase -
  RIN70_RS02780 (RIN70_02780) rsmB 538189..539502 (+) 1314 WP_049516133.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  RIN70_RS02785 (RIN70_02785) - 539524..540264 (+) 741 WP_195623712.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  RIN70_RS02790 (RIN70_02790) stkP 540261..542132 (+) 1872 WP_129824774.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  RIN70_RS02795 (RIN70_02795) - 542623..544422 (+) 1800 WP_195623711.1 CAP domain-containing protein -
  RIN70_RS02800 (RIN70_02800) liaF 544598..545293 (+) 696 WP_049474474.1 cell wall-active antibiotics response protein LiaF -
  RIN70_RS02805 (RIN70_02805) - 545290..546306 (+) 1017 WP_129824776.1 sensor histidine kinase -
  RIN70_RS02810 (RIN70_02810) - 546303..546935 (+) 633 WP_195623710.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 623 a.a.        Molecular weight: 68485.68 Da        Isoelectric Point: 6.4313

>NTDB_id=878856 RIN70_RS02790 WP_129824774.1 540261..542132(+) (stkP) [Streptococcus parasanguinis strain 30.8.10]
MIQIGKIFAGRYKIIQQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDPIAVARFQREAKAMAELDHPNIVRITDIG
EEEGQQYLAMEYVAGLDLKRYIKENAPLSNEEAVRLMGQILLAMRLAHTRGIIHRDLKPQNVLLTPDGTAKVSDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIREENKNVP
QALENVVIKATAKKLTDRYKSVAEMYVDLSSCLSYERRNEKKLVFEDQAKADTKTLPKVSPTPKTAPVPISEVRSEISSV
DPNRPLSDQQTMAPSKKPRRRLRARYKVLFVAIALVLAAFTFLLYMSPANKTVPDVSGKTVAEARAVIEGQDLQVGEEKE
EYSDSVAEGYVIRTNPNAGAQKKEQSRIDLIVSKGPSSFEMPNYVGKTRAAAEKDLKNTYKVSSKMITVEEVETFDYAAG
TVLEQTPAAGEQYSLNSKTKIVLKVAKETTSIEMPNYIGSTYEFARSNLTDIFGIKEANIELRKTDHLPDGVVVSAGQIV
SQTPEVSSTVDINRTRIVLTVYEPKVTASSSTKASSSSETSSSSSSERSDTETSSSSSSTDTD

Nucleotide


Download         Length: 1872 bp        

>NTDB_id=878856 RIN70_RS02790 WP_129824774.1 540261..542132(+) (stkP) [Streptococcus parasanguinis strain 30.8.10]
ATGATTCAAATCGGCAAAATTTTTGCCGGGCGATATAAAATCATCCAACAAATTGGACGCGGCGGGATGGCAGATGTTTA
TCTTGCGCGTGATTTGATTTTAGATGGGGAAGAAGTTGCAGTCAAGGTACTGCGTACGAATTACCAGACGGATCCCATTG
CAGTTGCGCGTTTTCAGCGTGAAGCAAAGGCGATGGCAGAGCTGGACCATCCAAATATCGTTCGGATTACAGACATTGGC
GAAGAAGAAGGACAACAATACCTTGCAATGGAATATGTTGCAGGTTTAGACTTGAAACGCTATATCAAAGAAAATGCTCC
TTTATCAAATGAAGAAGCTGTTCGTTTGATGGGGCAGATCCTTCTAGCTATGCGTCTTGCCCATACGCGTGGCATTATCC
ATAGAGATTTAAAACCACAGAATGTCCTCTTGACACCAGATGGAACAGCAAAAGTTTCAGACTTTGGGATTGCAGTGGCC
TTCGCAGAGACTAGCTTGACCCAGACCAACTCGATGTTGGGGTCGGTTCATTATTTGTCCCCTGAGCAGGCGCGTGGTTC
AAAAGCTACGGTGCAAAGTGACATCTACGCGATGGGGATCATTTTCTATGAAATGTTGACAGGACACATTCCTTATGATG
GAGATAGCGCCGTTACAATCGCTTTGCAGCATTTTCAAAAGCCGCTCCCATCTATTCGTGAAGAAAATAAGAATGTTCCA
CAAGCTTTAGAAAATGTGGTGATCAAGGCGACAGCTAAAAAACTGACGGATCGCTATAAATCAGTGGCTGAGATGTATGT
GGATCTTTCAAGTTGCTTGTCCTATGAGAGAAGAAATGAGAAAAAACTAGTTTTTGAAGACCAAGCGAAAGCTGATACAA
AGACTCTTCCAAAAGTGAGTCCAACTCCAAAGACAGCTCCTGTTCCAATCTCTGAAGTACGCAGTGAAATCAGTTCGGTT
GATCCGAATCGACCATTATCTGACCAGCAGACAATGGCGCCAAGTAAAAAGCCAAGAAGACGCTTGCGGGCGCGCTACAA
GGTCTTGTTTGTTGCCATTGCCCTAGTTCTTGCTGCCTTTACTTTCTTGTTGTATATGAGCCCAGCCAATAAAACAGTTC
CTGATGTTTCCGGCAAAACCGTTGCCGAAGCTAGAGCGGTTATTGAGGGACAAGACCTTCAAGTTGGTGAAGAGAAAGAA
GAGTACAGTGATTCGGTTGCAGAAGGCTACGTCATTCGAACCAATCCAAATGCAGGGGCCCAAAAGAAAGAACAAAGTCG
AATTGATTTGATCGTTTCAAAAGGACCAAGCAGCTTTGAAATGCCAAATTACGTGGGTAAAACACGGGCAGCAGCTGAAA
AGGATCTGAAAAACACTTATAAAGTATCAAGCAAAATGATCACCGTTGAAGAAGTTGAGACCTTTGATTATGCTGCAGGG
ACAGTTCTTGAACAAACGCCAGCAGCCGGAGAACAATATTCTCTGAATTCAAAGACTAAGATTGTTTTGAAAGTGGCGAA
GGAAACAACATCGATTGAGATGCCAAACTATATTGGTTCAACCTATGAATTTGCTCGAAGCAATTTGACTGATATCTTTG
GAATTAAAGAAGCCAATATTGAATTAAGAAAGACGGATCATCTCCCTGATGGGGTAGTTGTTTCTGCCGGTCAAATTGTC
AGTCAAACACCAGAGGTTTCAAGTACGGTGGATATTAACCGAACACGAATCGTTTTAACGGTATATGAACCTAAAGTGAC
AGCTTCTTCGAGTACAAAAGCCTCATCAAGTTCAGAAACATCTAGTTCCTCTTCTTCAGAACGATCGGATACCGAAACCT
CTAGCAGTAGTAGTTCAACAGATACAGATTAA

Domains

Predicted by InterproScan.

PASTA domain (PASTA)

(512-582)

PASTA domain (PASTA)

(372-434)

PASTA domain (PASTA)

(440-507)

Protein kinase domain (Pkinase)

(12-245)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

62.604

96.148

0.602
  stkP Streptococcus pneumoniae D39

62.437

96.148

0.6
  stkP Streptococcus pneumoniae R6

62.437

96.148

0.6
  stkP Streptococcus pneumoniae Rx1

62.27

96.148

0.599
  pknB Streptococcus mutans UA159

59.116

87.159

0.515
  stkP/pknB Streptococcus salivarius strain HSISS4

54.344

94.222

0.512