Detailed information NTG0877649

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RIM62_RS05345
• Genome accession: NZ_CP133950
• Coordinates: 1095761..1096606 (-)
• Length: 281 a.a.
• NCBI ID: WP_012677974.1
• Uniprot ID: A0A6M1KS91
• Organism: Streptococcus equi subsp. zooepidemicus strain ZHZ211
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1090761..1101606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM62_RS05330 (RIM62_05330)	-	1092032..1092745 (-)	714	WP_043040561.1	DUF3307 domain-containing protein	-
RIM62_RS05335 (RIM62_05335)	-	1092766..1093413 (-)	648	WP_043030796.1	SatD family protein	-
RIM62_RS05340 (RIM62_05340)	topA	1093528..1095660 (-)	2133	WP_317583105.1	type I DNA topoisomerase	-
RIM62_RS05345 (RIM62_05345)	dprA	1095761..1096606 (-)	846	WP_012677974.1	DNA-processing protein DprA	Machinery gene
RIM62_RS05350 (RIM62_05350)	-	1096862..1097644 (-)	783	WP_317583242.1	ribonuclease HII	-
RIM62_RS05355 (RIM62_05355)	ylqF	1097625..1098482 (-)	858	WP_206158626.1	ribosome biogenesis GTPase YlqF	-
RIM62_RS05360 (RIM62_05360)	-	1099065..1099697 (-)	633	WP_037578246.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31330.23 Da
• Isoelectric Point: 8.8540

>NTDB_id=877649 RIM62_RS05345 WP_012677974.1 1095761..1096606(-) (dprA) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDIAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYHYS

Nucleotide

• Length: 846 bp

>NTDB_id=877649 RIM62_RS05345 WP_012677974.1 1095761..1096606(-) (dprA) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGAACAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTGACTAATTTAAATATTCTTAACCTTATTGACTACCAGCA
ACGTAATAACAAGTCTCTATCCCTTAGAGATATAGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAGACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAACCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCCCTGAGGGAAATCTACAATCCCCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAGCCTAAGCT
GGCAGTCGTTGGCTCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTACAAAATCATCAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
CGTGCTCAGTGAATATGGGGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGGACATCAGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACCACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

3D structure

• AlphaFold DB: A0A6M1KS91

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.571	99.644	0.683
dprA/cilB/dalA	Streptococcus mitis SK321	59.643	99.644	0.594
dprA/cilB/dalA	Streptococcus pneumoniae D39	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae R6	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.929	99.644	0.587
dprA	Lactococcus lactis subsp. cremoris KW2	56.584	100	0.566
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377