Detailed information NTG0877639

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: RIM62_RS02645
• Genome accession: NZ_CP133950
• Coordinates: 519579..521735 (-)
• Length: 718 a.a.
• NCBI ID: WP_165619216.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain ZHZ211
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 514579..526735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM62_RS02615 (RIM62_02615)	-	514671..514928 (+)	258	WP_038674051.1	Blp family class II bacteriocin	-
RIM62_RS02620 (RIM62_02620)	-	514945..515148 (+)	204	WP_012516120.1	TmhB bacteriocin enhancer peptide	-
RIM62_RS02625 (RIM62_02625)	comE/blpR	515775..516524 (+)	750	WP_111690344.1	LytTR family DNA-binding domain-containing protein	Regulator
RIM62_RS10485	-	516524..517858 (+)	1335	WP_115266688.1	sensor histidine kinase	-
RIM62_RS02635 (RIM62_02635)	-	517976..518110 (-)	135	WP_012516117.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
RIM62_RS02640 (RIM62_02640)	-	518210..519568 (-)	1359	WP_115266689.1	bacteriocin secretion accessory protein	-
RIM62_RS02645 (RIM62_02645)	comA/nlmT	519579..521735 (-)	2157	WP_165619216.1	peptide cleavage/export ABC transporter	Regulator
RIM62_RS02650 (RIM62_02650)	-	521994..522242 (+)	249	WP_012677516.1	garvicin Q family class II bacteriocin	-
RIM62_RS02655 (RIM62_02655)	-	522249..522548 (+)	300	WP_041790663.1	bacteriocin immunity protein	-
RIM62_RS02665 (RIM62_02665)	-	524721..524939 (+)	219	WP_021321057.1	leucocin A/sakacin P family class II bacteriocin	-
RIM62_RS02670 (RIM62_02670)	-	524939..525235 (+)	297	WP_043040989.1	bacteriocin immunity protein	-
RIM62_RS02675 (RIM62_02675)	-	525387..525641 (+)	255	WP_111692691.1	Blp family class II bacteriocin	-
RIM62_RS02680 (RIM62_02680)	-	525658..525861 (+)	204	WP_012516109.1	Blp family class II bacteriocin	-

Sequence

Protein

• Length: 718 a.a.
• Molecular weight: 80589.80 Da
• Isoelectric Point: 7.7844

>NTDB_id=877639 RIM62_RS02645 WP_165619216.1 519579..521735(-) (comA/nlmT) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MTLFYKRTFVPQIDARDCGVAALASIARYYGSDYSLAHLRELAKTNKEGTTALGIVMAAKEMGFETRPIQADMTLFDMAD
VPYPLIVHVNKEGKLQHYYVVYKSKKDYLIIGDPDPMVKVTKMSKERFASEWTGVTICLAPKPNYKPHKDQKNGLLGFFP
LIFKQRALIFYIVLASVLVTVINIAGSYYLQGILDEYIPNQLKSTLGIVSIGLIITYILQQLMSFSRDYLLTVLSQRLTI
DVILSYIRHIFELPMSFFATRRTGEVTSRFTDANSIIDALASTILSLFLDLSILAIVGSVLLVQNSRLFLLSLISIPVYT
IIICAFIKPFEQMNHDVMQSNAMLSSAIIEDINGIETIKSLTSEENRYQKIDSDFVDYLDKSFKLSKYTILQATLKQGAQ
LILNIIILWFGAQLVINGRISIGQLITFNTLLAYFTTPLENIINLQTKLQAAKVANNRLNEVYLVESEFKASQALYDLSL
LQGDIQFEAVSYRYGFGKDTLSDITLTIKQGAKVTLVGVSGSGKTTLAKMLVNFFEPYKGRITINQNDLKTIDKKNLRQY
INYLPQQAYVFNGSILENLTLGAKQGISQEDILKACEIADIRHDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTQA
PILVLDEATSGLDILTEKKIIDRLMNMTDKTIIFVAHRLSIAERTDQIVVLNQGQIIETGSHQELMKQGGFYYHLFSE

Nucleotide

• Length: 2157 bp

>NTDB_id=877639 RIM62_RS02645 WP_165619216.1 519579..521735(-) (comA/nlmT) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGACACTCTTTTATAAAAGAACCTTTGTACCACAAATAGATGCCAGAGATTGTGGCGTAGCTGCTCTAGCTTCGATCGC
AAGGTATTATGGTTCAGATTATTCATTAGCTCATTTGAGAGAATTAGCAAAGACCAATAAGGAAGGGACAACAGCCCTCG
GTATTGTTATGGCTGCTAAGGAAATGGGATTTGAAACCAGACCCATTCAAGCGGATATGACCCTCTTTGACATGGCAGAC
GTGCCCTATCCATTGATCGTCCATGTCAATAAAGAAGGAAAGCTACAGCACTACTATGTGGTCTACAAATCTAAAAAAGA
CTATCTTATCATTGGTGATCCCGATCCAATGGTCAAGGTCACAAAAATGTCCAAGGAACGCTTTGCTTCTGAATGGACAG
GTGTCACCATATGTCTTGCTCCTAAGCCAAATTATAAACCACATAAAGACCAAAAAAATGGACTATTAGGCTTCTTTCCG
CTTATTTTTAAACAGCGAGCCCTTATTTTTTATATCGTGTTAGCTTCTGTCTTGGTAACAGTCATTAATATTGCTGGTTC
ATACTATCTCCAAGGGATTTTAGACGAGTATATTCCAAATCAGCTGAAATCTACCTTAGGGATTGTATCAATTGGTCTCA
TCATTACCTATATACTCCAGCAGCTAATGAGCTTTTCTAGAGATTATCTTTTAACTGTCCTTAGCCAACGTCTTACGATT
GATGTGATCCTGTCCTATATCCGCCATATTTTCGAATTGCCGATGTCCTTTTTTGCAACACGTCGAACAGGTGAGGTAAC
CTCGCGCTTTACAGATGCTAACTCTATCATTGACGCACTCGCTTCAACCATTTTATCCCTCTTTCTAGACCTCTCTATAT
TAGCTATTGTCGGAAGTGTTCTTTTGGTGCAAAATAGCAGGCTTTTTTTGCTATCCCTGATTTCTATCCCAGTATATACC
ATTATCATATGTGCCTTTATAAAGCCGTTTGAACAAATGAATCATGATGTGATGCAAAGCAATGCCATGCTAAGCTCTGC
TATTATCGAAGATATCAACGGGATCGAAACCATAAAATCACTAACCAGTGAAGAAAACCGTTACCAAAAAATTGACAGCG
ACTTTGTGGATTACCTTGATAAGTCTTTTAAGCTTAGTAAATATACCATCTTACAAGCCACACTTAAGCAAGGAGCGCAG
CTAATTCTGAATATCATCATTCTTTGGTTTGGGGCTCAACTGGTTATTAATGGTAGGATTTCAATCGGGCAGTTAATTAC
CTTTAACACACTTCTTGCCTATTTTACAACCCCTTTAGAAAATATCATTAATCTTCAAACCAAGCTCCAAGCAGCTAAGG
TTGCCAATAATCGTCTCAATGAGGTCTATCTTGTAGAGTCCGAATTTAAAGCCTCGCAAGCCTTATACGATTTATCGCTC
TTACAGGGTGACATTCAGTTTGAAGCTGTTTCCTACAGGTATGGCTTTGGCAAGGATACATTATCAGATATTACATTAAC
CATTAAGCAGGGAGCAAAAGTAACCCTTGTTGGTGTCAGCGGCTCAGGAAAAACAACCCTAGCCAAGATGCTCGTCAATT
TCTTTGAGCCTTATAAGGGACGTATAACCATCAACCAAAACGATCTCAAGACCATTGATAAAAAGAATCTTCGACAATAC
ATCAACTACCTTCCACAACAAGCCTATGTGTTTAATGGATCTATCTTAGAAAATCTAACCTTGGGAGCCAAGCAGGGCAT
CAGCCAGGAAGACATTCTTAAAGCCTGTGAGATTGCTGACATTCGTCACGACATCGAGCAAATGCCAATGGGATACCAAA
CCGAGCTCTCTGATGGGGCTGGCTTATCTGGCGGACAAAAACAGAGAATTGCACTTGCTAGAGCATTACTAACCCAAGCT
CCTATACTAGTTCTTGATGAAGCAACCAGCGGACTTGACATACTGACAGAAAAGAAAATCATTGACCGTCTCATGAACAT
GACAGACAAAACGATTATTTTCGTTGCCCACCGGCTTAGTATCGCAGAGCGCACTGATCAGATTGTTGTTCTTAATCAAG
GGCAAATCATTGAAACAGGCAGCCACCAGGAATTAATGAAACAAGGTGGATTTTATTACCACCTATTTAGTGAATAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-439)

• ABC transporter (ABC_tran) (501-650)

• Peptidase C39 family (Peptidase_C39) (8-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	70.99	99.861	0.709
comA	Streptococcus mitis SK321	67.602	99.304	0.671
comA	Streptococcus mitis NCTC 12261	67.321	99.304	0.669
comA	Streptococcus pneumoniae Rx1	66.9	99.304	0.664
comA	Streptococcus pneumoniae D39	66.9	99.304	0.664
comA	Streptococcus pneumoniae R6	66.9	99.304	0.664
comA	Streptococcus pneumoniae TIGR4	66.62	99.304	0.662
comA	Streptococcus gordonii str. Challis substr. CH1	65.217	99.304	0.648