Detailed information NTG0875994

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RGU78_RS01465
• Genome accession: NZ_CP133712
• Coordinates: 313811..314869 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain CRAb1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 308811..319869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGU78_RS01450 (RGU78_01455)	-	309916..310248 (+)	333	WP_000169594.1	hypothetical protein	-
RGU78_RS01455 (RGU78_01460)	-	310251..311075 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
RGU78_RS01460 (RGU78_01465)	ponA	311093..313648 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
RGU78_RS01465 (RGU78_01470)	pilM	313811..314869 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RGU78_RS01470 (RGU78_01475)	pilN	314869..315510 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
RGU78_RS01475 (RGU78_01480)	pilO	315507..316247 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RGU78_RS01480 (RGU78_01485)	pilP	316258..316785 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RGU78_RS01485 (RGU78_01490)	pilQ	316853..319018 (+)	2166	WP_342041234.1	type IV pilus secretin PilQ	Machinery gene
RGU78_RS01490 (RGU78_01495)	aroK	319030..319599 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=875994 RGU78_RS01465 WP_002014066.1 313811..314869(+) (pilM) [Acinetobacter baumannii strain CRAb1]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=875994 RGU78_RS01465 WP_002014066.1 313811..314869(+) (pilM) [Acinetobacter baumannii strain CRAb1]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423