Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | RGU78_RS01470 | Genome accession | NZ_CP133712 |
| Coordinates | 314869..315510 (+) | Length | 213 a.a. |
| NCBI ID | WP_000201227.1 | Uniprot ID | A0A009HSE6 |
| Organism | Acinetobacter baumannii strain CRAb1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 309869..320510
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGU78_RS01450 (RGU78_01455) | - | 309916..310248 (+) | 333 | WP_000169594.1 | hypothetical protein | - |
| RGU78_RS01455 (RGU78_01460) | - | 310251..311075 (+) | 825 | WP_002019666.1 | putative RNA methyltransferase | - |
| RGU78_RS01460 (RGU78_01465) | ponA | 311093..313648 (-) | 2556 | WP_000736677.1 | penicillin-binding protein PBP1a | - |
| RGU78_RS01465 (RGU78_01470) | pilM | 313811..314869 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| RGU78_RS01470 (RGU78_01475) | pilN | 314869..315510 (+) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| RGU78_RS01475 (RGU78_01480) | pilO | 315507..316247 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| RGU78_RS01480 (RGU78_01485) | pilP | 316258..316785 (+) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| RGU78_RS01485 (RGU78_01490) | pilQ | 316853..319018 (+) | 2166 | WP_342041234.1 | type IV pilus secretin PilQ | Machinery gene |
| RGU78_RS01490 (RGU78_01495) | aroK | 319030..319599 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24019.35 Da Isoelectric Point: 5.3968
>NTDB_id=875995 RGU78_RS01470 WP_000201227.1 314869..315510(+) (pilN) [Acinetobacter baumannii strain CRAb1]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=875995 RGU78_RS01470 WP_000201227.1 314869..315510(+) (pilN) [Acinetobacter baumannii strain CRAb1]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comN | Acinetobacter baylyi ADP1 |
71.905 |
98.592 |
0.709 |