Detailed information NTG0874531

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RDV54_RS08555
• Genome accession: NZ_CP133471
• Coordinates: 1784122..1785189 (+)
• Length: 355 a.a.
• NCBI ID: WP_000159550.1
• Uniprot ID: F9HAA0
• Organism: Streptococcus mitis strain LMG 14557
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1779122..1790189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV54_RS08540 (RDV54_08540)	amiA3	1779636..1781624 (+)	1989	WP_000749582.1	peptide ABC transporter substrate-binding protein	Regulator
RDV54_RS08545 (RDV54_08545)	amiC	1781691..1783187 (+)	1497	WP_000759915.1	ABC transporter permease	Regulator
RDV54_RS08550 (RDV54_08550)	amiD	1783187..1784113 (+)	927	WP_000103691.1	oligopeptide ABC transporter permease OppC	Regulator
RDV54_RS08555 (RDV54_08555)	amiE	1784122..1785189 (+)	1068	WP_000159550.1	ABC transporter ATP-binding protein	Regulator
RDV54_RS08560 (RDV54_08560)	amiF	1785200..1786126 (+)	927	WP_001291284.1	ATP-binding cassette domain-containing protein	Regulator
RDV54_RS08565 (RDV54_08565)	-	1786530..1787408 (-)	879	WP_001049302.1	LysR family transcriptional regulator	-
RDV54_RS08570 (RDV54_08570)	-	1787536..1787886 (-)	351	WP_000208711.1	helix-turn-helix domain-containing protein	-
RDV54_RS08575 (RDV54_08575)	-	1788160..1789785 (+)	1626	WP_000200491.1	malolactic enzyme	-
RDV54_RS08580 (RDV54_08580)	-	1789987..1790106 (+)	120	Protein_1637	IS630 family transposase	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39491.07 Da
• Isoelectric Point: 4.8078

>NTDB_id=874531 RDV54_RS08555 WP_000159550.1 1784122..1785189(+) (amiE) [Streptococcus mitis strain LMG 14557]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFDEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide

• Length: 1068 bp

>NTDB_id=874531 RDV54_RS08555 WP_000159550.1 1784122..1785189(+) (amiE) [Streptococcus mitis strain LMG 14557]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGGAAATCTGTTT
TGACAAAGACATTCACAGGTATGCTTGAAGAAAACGGTCGCATTGCCCAAGGTAGTATTGACTACCGTGGTCAAGATTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGCGCTAAGATTGCGACTATCTTCCAAGATCCAATGACTAG
TTTGGACCCAATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGGATTCCAGATGCAGATAGACGTTTTGATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCTCTTGCCTGCCGACCTGATGTCTTGATTTGTGATGAGCCAAC
GACTGCCTTGGATGTGACCATCCAAGCTCAGATTATTGATTTGTTGAAATCTTTACAAAACGAGTACCATTTCACAACAA
TCTTTATCACCCACGACCTTGGTGTGGTGGCAAGTATTGCAGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACTGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGTGATGCCTTTGCCT
TGCGTTCTGACTATGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTACTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATTCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

3D structure

• AlphaFold DB: F9HAA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	87.887	100	0.879
amiE	Streptococcus thermophilus LMG 18311	86.197	100	0.862
amiE	Streptococcus thermophilus LMD-9	86.197	100	0.862
oppD	Streptococcus mutans UA159	54.261	99.155	0.538