Detailed information NTG0874528

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: WJ060_RS08670
• Genome accession: NZ_CP149492
• Coordinates: 1773229..1773831 (-)
• Length: 200 a.a.
• NCBI ID: WP_000271544.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain BPH2947
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1768229..1778831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJ060_RS08650 (WJ060_08640)	yajC	1769725..1769985 (-)	261	WP_001160682.1	preprotein translocase subunit YajC	-
WJ060_RS08655 (WJ060_08645)	tgt	1770004..1771143 (-)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
WJ060_RS08660 (WJ060_08650)	queA	1771166..1772191 (-)	1026	WP_001019171.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
WJ060_RS08665 (WJ060_08655)	ruvB	1772193..1773197 (-)	1005	WP_001005767.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
WJ060_RS08670 (WJ060_08660)	ruvA	1773229..1773831 (-)	603	WP_000271544.1	Holliday junction branch migration protein RuvA	Machinery gene
WJ060_RS08675 (WJ060_08665)	-	1773845..1774300 (-)	456	WP_000368902.1	ACT domain-containing protein	-
WJ060_RS08680 (WJ060_08670)	obgE	1774313..1775605 (-)	1293	WP_000496100.1	GTPase ObgE	-
WJ060_RS08685 (WJ060_08675)	rpmA	1775960..1776244 (-)	285	WP_000916187.1	50S ribosomal protein L27	-
WJ060_RS08690 (WJ060_08680)	-	1776256..1776576 (-)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
WJ060_RS08695 (WJ060_08685)	rplU	1776582..1776890 (-)	309	WP_000457385.1	50S ribosomal protein L21	-
WJ060_RS08700 (WJ060_08690)	mreD	1777057..1777588 (-)	532	Protein_1713	rod shape-determining protein MreD	-
WJ060_RS08705 (WJ060_08695)	mreC	1777588..1778430 (-)	843	WP_000911041.1	rod shape-determining protein MreC	-
WJ060_RS08710 (WJ060_08700)	-	1778630..1778749 (-)	120	Protein_1715	hypothetical protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22236.42 Da
• Isoelectric Point: 6.2380

>NTDB_id=874528 WJ060_RS08670 WP_000271544.1 1773229..1773831(-) (ruvA) [Staphylococcus aureus strain BPH2947]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLHGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=874528 WJ060_RS08670 WP_000271544.1 1773229..1773831(-) (ruvA) [Staphylococcus aureus strain BPH2947]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGCATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATTA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA, C-terminal domain (RuvA_C) (156-197)

• RuvA N terminal domain (RuvA_N) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae R6	45.226	99.5	0.45
ruvA	Streptococcus pneumoniae D39	45.226	99.5	0.45
ruvA	Bacillus subtilis subsp. subtilis str. 168	42.211	99.5	0.42