Detailed information NTG0874516

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: RDV54_RS08020
• Genome accession: NZ_CP133471
• Coordinates: 1688422..1688745 (+)
• Length: 107 a.a.
• NCBI ID: WP_000738641.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain LMG 14557
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1683422..1693745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV54_RS07995 (RDV54_07995)	nagA	1683552..1684703 (+)	1152	WP_001134449.1	N-acetylglucosamine-6-phosphate deacetylase	-
RDV54_RS08000 (RDV54_08000)	-	1684866..1685924 (+)	1059	WP_000649460.1	zinc-dependent alcohol dehydrogenase family protein	-
RDV54_RS08005 (RDV54_08005)	-	1686074..1686439 (+)	366	WP_000286405.1	DUF1033 family protein	-
RDV54_RS08010 (RDV54_08010)	comGA/cglA/cilD	1686515..1687456 (+)	942	WP_000249545.1	competence type IV pilus ATPase ComGA	Machinery gene
RDV54_RS08015 (RDV54_08015)	comGB/cglB	1687404..1688420 (+)	1017	WP_004238896.1	competence type IV pilus assembly protein ComGB	Machinery gene
RDV54_RS08020 (RDV54_08020)	comGC/cglC	1688422..1688745 (+)	324	WP_000738641.1	comG operon protein ComGC	Machinery gene
RDV54_RS08025 (RDV54_08025)	comGD/cglD	1688708..1689142 (+)	435	WP_029689647.1	competence type IV pilus minor pilin ComGD	Machinery gene
RDV54_RS08030 (RDV54_08030)	comGE/cglE	1689105..1689407 (+)	303	WP_045597458.1	competence type IV pilus minor pilin ComGE	Machinery gene
RDV54_RS08035 (RDV54_08035)	comGF/cglF	1689370..1689831 (+)	462	WP_000250509.1	competence type IV pilus minor pilin ComGF	Machinery gene
RDV54_RS08040 (RDV54_08040)	comGG/cglG	1689809..1690222 (+)	414	WP_000265657.1	competence type IV pilus minor pilin ComGG	Machinery gene
RDV54_RS08045 (RDV54_08045)	-	1690255..1690842 (+)	588	WP_000679792.1	class I SAM-dependent methyltransferase	-
RDV54_RS08050 (RDV54_08050)	comYH	1690903..1691856 (+)	954	WP_000345104.1	class I SAM-dependent methyltransferase	Machinery gene
RDV54_RS08055 (RDV54_08055)	-	1691906..1693096 (+)	1191	WP_000167778.1	acetate kinase	-
RDV54_RS08060 (RDV54_08060)	rnpA	1693246..1693617 (+)	372	WP_000739243.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 11958.09 Da
• Isoelectric Point: 9.9097

>NTDB_id=874516 RDV54_RS08020 WP_000738641.1 1688422..1688745(+) (comGC/cglC) [Streptococcus mitis strain LMG 14557]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD

Nucleotide

• Length: 324 bp

>NTDB_id=874516 RDV54_RS08020 WP_000738641.1 1688422..1688745(+) (comGC/cglC) [Streptococcus mitis strain LMG 14557]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAAGCTTTCACGCTTGTGGAAATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCGGTCAATGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGTCAGGCAGAGCTTTATAGCTTGGATAAAAATGAAGATGCTAGTCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis NCTC 12261	100	100	1
comGC/cglC	Streptococcus mitis SK321	93.204	96.262	0.897
comGC/cglC	Streptococcus pneumoniae Rx1	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae D39	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae R6	92.157	95.327	0.879
comGC/cglC	Streptococcus pneumoniae TIGR4	90.291	96.262	0.869
comYC	Streptococcus gordonii str. Challis substr. CH1	69.524	98.131	0.682
comYC	Streptococcus mutans UA140	68.421	88.785	0.607
comYC	Streptococcus mutans UA159	68.421	88.785	0.607
comYC	Streptococcus suis isolate S10	70.37	75.701	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	54.455	94.393	0.514
comGC	Staphylococcus aureus MW2	51.163	80.374	0.411
comGC	Staphylococcus aureus N315	51.163	80.374	0.411