Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   Q9Q86_RS11955 Genome accession   NZ_CP133162
Coordinates   2447911..2449038 (+) Length   375 a.a.
NCBI ID   WP_112986699.1    Uniprot ID   A0A365PF70
Organism   Acinetobacter sp. A22     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2442911..2454038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9Q86_RS11935 - 2443470..2445566 (-) 2097 WP_112986700.1 TonB-dependent copper receptor -
  Q9Q86_RS11940 - 2445640..2446077 (-) 438 WP_004967052.1 DUF2946 family protein -
  Q9Q86_RS11945 def 2446099..2446629 (-) 531 WP_004905508.1 peptide deformylase -
  Q9Q86_RS11950 tsaP 2446750..2447901 (+) 1152 WP_004905510.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Q9Q86_RS11955 dprA 2447911..2449038 (+) 1128 WP_112986699.1 DNA-processing protein DprA Machinery gene
  Q9Q86_RS11960 - 2449076..2449645 (+) 570 WP_112986698.1 Sua5/YciO/YrdC/YwlC family protein -
  Q9Q86_RS11965 - 2450040..2450960 (-) 921 WP_112986697.1 DMT family transporter -
  Q9Q86_RS11970 - 2451064..2451729 (-) 666 WP_004967048.1 TetR/AcrR family transcriptional regulator -
  Q9Q86_RS11975 - 2451846..2453066 (+) 1221 WP_112986696.1 MFS transporter -
  Q9Q86_RS11980 - 2453082..2453855 (+) 774 WP_004967045.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 42364.31 Da        Isoelectric Point: 7.1137

>NTDB_id=872204 Q9Q86_RS11955 WP_112986699.1 2447911..2449038(+) (dprA) [Acinetobacter sp. A22]
MLNQLSPHHYHTVLVWYLVQHSLSSFHKILKHFGSCEQATQNHRFSEWYQLSLHANHLKRLEEFQSTQGQKQFEQIVQLI
LKHCDFIVTPHDIDYPKQLMPYADHPPILFGQGHLQALLQPQIALVGSRKPSPHGRQVAYDFAYYLSEKGFYITSGLAHG
IDEAAHRGGLAHHRSIAVTGTGLDTVYPTQNKPLAQQIAQSGAIITEFLPTTLPLQQHFPRRNRIVSGLSLGVLVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEYHQGCHQLIREGAVLVDHPEQIIEDLALPTHWQTQQHTKDAVEQHSTLPPHL
ISLYQNLDWIGQDLDLLSQRYPAPISEITSQLMELELLGLCIQQGGRYLRCRPIH

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=872204 Q9Q86_RS11955 WP_112986699.1 2447911..2449038(+) (dprA) [Acinetobacter sp. A22]
ATGTTGAATCAATTATCACCCCACCACTACCATACCGTGTTGGTGTGGTATTTGGTTCAACATTCCCTATCCAGCTTTCA
CAAAATTCTGAAACATTTTGGGAGTTGTGAACAAGCAACACAAAACCACAGATTCTCTGAGTGGTATCAACTCAGTTTAC
ATGCAAACCATCTAAAACGCTTAGAAGAATTTCAAAGTACACAAGGTCAAAAACAATTTGAACAGATAGTTCAACTGATT
TTGAAGCACTGTGACTTTATCGTGACGCCACACGATATTGACTATCCCAAACAACTCATGCCTTATGCAGATCATCCCCC
CATATTATTTGGTCAAGGTCATCTTCAGGCTTTACTGCAACCGCAAATTGCATTGGTGGGGAGCCGCAAACCTAGTCCAC
ATGGTCGCCAAGTGGCTTATGATTTTGCTTATTACCTTAGTGAGAAAGGATTTTATATTACCAGTGGTCTTGCACATGGG
ATTGATGAAGCTGCTCATCGCGGTGGCTTAGCACATCATCGAAGTATCGCTGTCACAGGTACTGGGTTAGATACCGTTTA
TCCCACTCAAAATAAACCATTGGCACAACAAATTGCTCAATCAGGTGCCATCATCACAGAGTTTCTTCCTACGACACTCC
CATTACAACAACATTTTCCACGACGAAATCGGATTGTTAGTGGCTTAAGTTTAGGTGTCTTAGTGGTTGAAGCAGCACTA
AAAAGTGGATCTTTGATTACGGCGAATGAAGCAGCCAATCAAGGTAAAATGGTATTTGCTATCCCTGGTCATATTTACAG
TGAATACCATCAAGGCTGTCATCAACTTATTCGTGAAGGGGCTGTTTTGGTCGATCATCCTGAACAGATTATTGAAGATT
TAGCATTACCTACACATTGGCAGACCCAACAACACACTAAAGATGCTGTAGAACAGCACTCAACACTTCCACCACATTTG
ATTAGCTTGTATCAGAATTTAGATTGGATTGGACAGGATTTAGATTTACTCAGCCAACGCTATCCAGCACCGATCTCTGA
AATCACATCTCAATTAATGGAATTAGAGTTACTAGGTTTGTGCATACAACAAGGTGGTCGCTATTTACGTTGTCGTCCAA
TCCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A365PF70

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

72.8

100

0.728

  dprA Acinetobacter baumannii strain A118

71.733

100

0.717

  dprA Acinetobacter baylyi ADP1

69.211

100

0.701

  dprA Vibrio cholerae strain A1552

42.373

94.4

0.4