Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   Q9Q86_RS11950 Genome accession   NZ_CP133162
Coordinates   2446750..2447901 (+) Length   383 a.a.
NCBI ID   WP_004905510.1    Uniprot ID   S7XRZ8
Organism   Acinetobacter sp. A22     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2441750..2452901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9Q86_RS11925 - 2442574..2442924 (+) 351 WP_112987694.1 IS630 transposase-related protein -
  Q9Q86_RS11930 - 2442875..2443417 (+) 543 WP_305155981.1 IS630 family transposase -
  Q9Q86_RS11935 - 2443470..2445566 (-) 2097 WP_112986700.1 TonB-dependent copper receptor -
  Q9Q86_RS11940 - 2445640..2446077 (-) 438 WP_004967052.1 DUF2946 family protein -
  Q9Q86_RS11945 def 2446099..2446629 (-) 531 WP_004905508.1 peptide deformylase -
  Q9Q86_RS11950 tsaP 2446750..2447901 (+) 1152 WP_004905510.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Q9Q86_RS11955 dprA 2447911..2449038 (+) 1128 WP_112986699.1 DNA-processing protein DprA Machinery gene
  Q9Q86_RS11960 - 2449076..2449645 (+) 570 WP_112986698.1 Sua5/YciO/YrdC/YwlC family protein -
  Q9Q86_RS11965 - 2450040..2450960 (-) 921 WP_112986697.1 DMT family transporter -
  Q9Q86_RS11970 - 2451064..2451729 (-) 666 WP_004967048.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 41829.95 Da        Isoelectric Point: 9.0745

>NTDB_id=872203 Q9Q86_RS11950 WP_004905510.1 2446750..2447901(+) (tsaP) [Acinetobacter sp. A22]
MKKVLNGIHSFHALGLKKQLIAVAICAGLGMTVNITHAASPNVSPPSVKAGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLIGKDEGDGCDGIIRRYTGGGTTLRPQVRIEALNNSVPVIPLAHIQQWLER
SSVLPADAIANTPYILGTADNRVLAGKGQSVYVRGQGLENGQRYGVYREGEPYIVVDEQGKKQNLGVELLQVASGVAVRN
ENDITTVELTDSYNGEVRRGDRVMLEQEAMLPTLFYPIDAKQVRDGGKVIRVLGSIGTAAKNGVVTVDRGTADGVEIGQV
FSTYQEGEIVQDPKTKEKVKLPGQYVGSLMIFKSFDRISYAYVLESELPIKVGSNIQPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=872203 Q9Q86_RS11950 WP_004905510.1 2446750..2447901(+) (tsaP) [Acinetobacter sp. A22]
ATGAAAAAGGTTTTAAACGGCATACACTCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCTGTTGCCATCTGTGC
AGGATTAGGCATGACGGTAAATATAACGCATGCAGCAAGCCCTAATGTTAGCCCACCCTCTGTTAAAGCTGGGGCACCAC
ATGTCTATGTAGTGAAAAAAGGCGATACCCTTTGGGATATCTCAGGCAAGTTTTTAAGTAAACCATGGCGCTGGCCAGAA
ATTTGGGCAAGCAATAAACACGTTAAGAATCCTCACTGGATTTATCCAGGTGACCGCTTACTACTCTGTAGTTTGAATGG
CAAACCGTTAATCGGTAAAGATGAAGGTGATGGCTGTGACGGTATTATTCGTCGTTATACAGGTGGCGGAACAACTTTAC
GTCCGCAAGTACGTATCGAAGCATTGAACAATAGTGTGCCAGTTATTCCATTGGCTCATATTCAACAATGGTTAGAACGT
AGTTCAGTATTACCAGCGGATGCGATTGCGAATACCCCTTATATCTTAGGCACAGCTGACAATCGCGTGCTTGCAGGCAA
AGGACAAAGTGTTTACGTCCGTGGTCAAGGTCTAGAAAATGGTCAGCGTTATGGCGTTTACCGTGAAGGTGAACCTTACA
TCGTTGTTGATGAGCAAGGCAAAAAGCAAAACCTAGGTGTTGAATTACTTCAAGTCGCATCTGGTGTTGCTGTGCGCAAT
GAAAACGACATTACTACGGTTGAACTCACTGATAGCTATAACGGCGAAGTTCGTCGTGGTGATCGCGTGATGCTTGAACA
AGAGGCAATGTTGCCAACCTTGTTCTATCCTATCGATGCAAAACAAGTACGCGATGGCGGTAAAGTGATTCGTGTATTAG
GATCGATTGGTACAGCCGCAAAAAATGGTGTTGTCACTGTTGATCGTGGTACTGCTGATGGCGTTGAAATTGGTCAAGTC
TTTAGCACCTACCAAGAGGGTGAGATCGTACAAGATCCAAAAACTAAAGAGAAAGTTAAATTACCTGGACAATATGTGGG
TAGCTTGATGATCTTCAAGAGTTTTGATCGTATCAGCTATGCCTACGTTTTAGAAAGTGAACTACCAATCAAGGTCGGTT
CAAACATTCAACCACCACGCTTGGATGACTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7XRZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.917

100

0.731