Detailed information NTG0871699

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RBH92_RS07450
• Genome accession: NZ_CP133083
• Coordinates: 1583654..1585165 (+)
• Length: 503 a.a.
• NCBI ID: WP_307931497.1
• Uniprot ID: -
• Organism: Nitrosomonas sp. sh817
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1578654..1590165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBH92_RS07425 (RBH92_07420)	-	1579491..1579859 (-)	369	WP_292925377.1	hypothetical protein	-
RBH92_RS07430 (RBH92_07425)	pepP	1579856..1581163 (-)	1308	WP_307931494.1	Xaa-Pro aminopeptidase	-
RBH92_RS07435 (RBH92_07430)	murU	1581172..1581882 (-)	711	WP_307933940.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
RBH92_RS07440 (RBH92_07435)	-	1581902..1582906 (-)	1005	WP_307931495.1	aminoglycoside phosphotransferase family protein	-
RBH92_RS07445 (RBH92_07440)	-	1583131..1583397 (+)	267	WP_307931496.1	accessory factor UbiK family protein	-
RBH92_RS07450 (RBH92_07445)	comM	1583654..1585165 (+)	1512	WP_307931497.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
RBH92_RS07455 (RBH92_07450)	thiS	1585657..1585860 (+)	204	WP_292925372.1	sulfur carrier protein ThiS	-
RBH92_RS07460 (RBH92_07455)	-	1585903..1586724 (+)	822	WP_307931498.1	thiazole synthase	-
RBH92_RS07465 (RBH92_07460)	trmB	1586755..1587426 (+)	672	WP_307931499.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
RBH92_RS07470 (RBH92_07465)	-	1587968..1589293 (+)	1326	WP_307931500.1	cytochrome c peroxidase	-

Sequence

Protein

• Length: 503 a.a.
• Molecular weight: 54662.53 Da
• Isoelectric Point: 9.0711

>NTDB_id=871699 RBH92_RS07450 WP_307931497.1 1583654..1585165(+) (comM) [Nitrosomonas sp. sh817]
MSLAVLYSRALSGIQAPLVTVETHIANGLPSFTIVGLPDTEVKESKDRVRSALQNAQFKIPPQRITVNLAPADLPKESGR
FDLPIALGILAATGQIPDDRLDQYEWAGELALTGELRPIHGALAMTYNASQSGRSFVLPQQNAAEAALVNNATIYGAQSL
LQICAHLTGQTPLPIYRNGAGNATGKQDASYPDLDDVKGQAHAKRALEIAAAGGHSLLMIGPPGTGKSMLATRFPGILPP
MTEAEALESAAIQSLAFGSFNIENWKKRPYRAPHHTASGVALVGGGSHPRPGEISLAMHGVLFLDELAEFDRKVLEVLRE
PLESGKITISRAARQAEFPARFQLITAMNPCPCGYLGHPSGRCHCTPDQIARYRGRISGPLLDRIDMQIEVPAVPQQELM
KQQITGEKSRTIRQRVEKAHQLQLNRQGKTNSNLSVKEIDQHCALDSASENLLKHAINRLNLSARAYHRILKLARTIADL
AGSEKITNQHIAEAIQYRRLDKQ

Nucleotide

• Length: 1512 bp

>NTDB_id=871699 RBH92_RS07450 WP_307931497.1 1583654..1585165(+) (comM) [Nitrosomonas sp. sh817]
ATGTCGCTTGCCGTTCTGTATAGCCGGGCGCTATCGGGTATTCAAGCTCCGCTGGTGACGGTGGAAACGCACATCGCTAA
CGGTTTACCCAGTTTCACCATCGTCGGTCTGCCCGATACCGAAGTGAAGGAAAGCAAAGACCGTGTTCGTTCAGCGTTGC
AAAACGCGCAATTCAAGATCCCGCCGCAACGCATTACCGTCAATCTGGCCCCTGCCGATCTGCCCAAGGAAAGCGGCCGC
TTCGATTTGCCGATTGCGTTGGGAATACTCGCAGCCACTGGACAAATCCCAGACGATCGCCTAGATCAATACGAATGGGC
GGGAGAACTGGCATTGACCGGAGAATTGCGCCCGATTCACGGTGCTTTGGCAATGACCTATAACGCCTCGCAATCCGGGC
GCAGCTTCGTACTGCCGCAACAGAATGCCGCAGAAGCGGCGCTGGTCAATAACGCGACGATCTATGGCGCCCAATCATTG
CTGCAAATCTGCGCCCACTTGACCGGACAAACACCATTACCGATTTATCGGAATGGCGCCGGAAATGCCACCGGCAAGCA
AGACGCCAGCTATCCCGATCTCGATGACGTCAAAGGCCAAGCACACGCGAAGCGTGCGCTGGAAATTGCAGCCGCCGGCG
GCCACAGTCTGCTGATGATCGGCCCGCCGGGCACCGGCAAGTCGATGCTGGCAACCCGCTTTCCCGGCATTTTGCCGCCG
ATGACCGAAGCCGAAGCGCTGGAATCCGCTGCGATCCAATCGCTCGCATTCGGCAGCTTCAATATCGAGAACTGGAAAAA
ACGCCCCTACCGCGCCCCGCACCATACCGCATCAGGGGTTGCTTTAGTTGGCGGCGGCAGCCACCCGCGCCCCGGTGAAA
TTTCACTCGCCATGCACGGCGTGTTGTTTCTCGACGAACTCGCGGAATTCGACCGCAAAGTCCTAGAAGTCCTGCGTGAA
CCGCTCGAATCCGGCAAAATCACCATCTCCCGTGCCGCTCGTCAGGCTGAATTTCCTGCACGTTTCCAGCTGATCACTGC
GATGAATCCCTGCCCCTGCGGTTACTTGGGCCATCCTTCAGGGCGTTGTCATTGCACCCCCGACCAAATCGCCCGCTACC
GCGGACGAATCTCCGGCCCATTACTCGACCGCATCGACATGCAAATCGAAGTTCCGGCAGTACCGCAGCAGGAACTAATG
AAACAGCAAATTACCGGTGAGAAAAGCCGCACCATCCGGCAGCGTGTAGAGAAAGCTCATCAATTACAACTGAACCGGCA
AGGAAAAACCAATAGCAACCTGAGCGTCAAAGAAATCGATCAGCACTGCGCACTCGACAGTGCCAGCGAGAATCTGCTGA
AACACGCCATCAACCGTTTGAATTTATCGGCGCGTGCGTATCATCGAATTTTGAAACTGGCGAGGACCATTGCGGATTTG
GCCGGGAGTGAAAAAATCACCAATCAGCATATTGCAGAAGCGATTCAGTATCGCAGGTTGGATAAGCAATAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (193-398)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (406-498)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.754	100	0.559
comM	Glaesserella parasuis strain SC1401	55.268	100	0.553
comM	Vibrio cholerae strain A1552	54.98	99.801	0.549
comM	Vibrio campbellii strain DS40M4	54.582	99.801	0.545
comM	Legionella pneumophila str. Paris	51.4	99.404	0.511
comM	Legionella pneumophila strain ERS1305867	51.4	99.404	0.511
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	47.244	100	0.477