Detailed information NTG0868786

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RAM00_RS02460
• Genome accession: NZ_CP132376
• Coordinates: 586157..587335 (+)
• Length: 392 a.a.
• NCBI ID: WP_084552755.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain K-FP26
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 581157..592335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAM00_RS02440 (RAM00_02435)	-	582139..583368 (+)	1230	WP_084551547.1	PilT/PilU family type 4a pilus ATPase	-
RAM00_RS02445 (RAM00_02440)	murU	583500..584201 (+)	702	WP_084551544.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
RAM00_RS02450 (RAM00_02445)	ruvC	584332..584883 (+)	552	WP_084584954.1	crossover junction endodeoxyribonuclease RuvC	-
RAM00_RS02455 (RAM00_02450)	-	584988..585773 (-)	786	WP_084565109.1	DUF2071 domain-containing protein	-
RAM00_RS02460 (RAM00_02455)	dprA	586157..587335 (+)	1179	WP_084552755.1	DNA-processing protein DprA	Machinery gene
RAM00_RS02465 (RAM00_02460)	-	587347..587805 (+)	459	WP_025329887.1	DUF494 family protein	-
RAM00_RS02470 (RAM00_02465)	topA	587947..590241 (+)	2295	WP_306176229.1	type I DNA topoisomerase	-
RAM00_RS02475 (RAM00_02470)	rsmD	590320..590892 (+)	573	WP_174831062.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RAM00_RS02480 (RAM00_02475)	-	590984..591238 (+)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42231.31 Da
• Isoelectric Point: 6.6279

>NTDB_id=868786 RAM00_RS02460 WP_084552755.1 586157..587335(+) (dprA) [Snodgrassella alvi strain K-FP26]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFCQRQVSKYWHSDVAKQATEAAIEWERAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITHDFAAALARKGVTIISGMASGADTAAHQ
GALQAMGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEATIESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDLLSVHSSDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=868786 RAM00_RS02460 WP_084552755.1 586157..587335(+) (dprA) [Snodgrassella alvi strain K-FP26]
ATGGATACGCAAGAACGCCTAGCCTGGATTGAATTGGCATTAACTCCGTTTGTGGGGGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCACAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTTGCCAACGGCAAGTCAGTA
AGTATTGGCATAGTGATGTAGCAAAACAGGCAACTGAAGCAGCTATAGAATGGGAGCGAGCGCATACTGATGCACGTTTA
TTACTACTGGCAGATAATGATTTTCCGGCAATGCTGACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGCCAGTGTTTGCATCAACCCGCTTTATCAATTGTTGGCAGTCGGCATGCCACACCACAAGCCATGCGCATTACTCATG
ATTTTGCAGCCGCACTGGCACGGAAAGGTGTAACAATTATTTCAGGCATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTACAGGCAATGGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAAAAA
TTTAGCCACACAAATTGCTGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGGTACTCGTCCTTCGCCCGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCACAATTGAATCGGGTTCATTGATT
ACTGCAAGACTGGCCGGAGAAATGGGGCGGGAAGTTATGGCTATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
TCACGCATTAATTAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTTATTATCAGTTCATTCATCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACGCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (335-385)

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.04	100	0.589
dprA	Neisseria meningitidis MC58	58.04	100	0.589
dprA	Neisseria gonorrhoeae strain FA1090	57.143	100	0.582
dprA	Neisseria gonorrhoeae MS11	56.892	100	0.579
dprA	Acinetobacter baumannii D1279779	37.467	96.684	0.362