Detailed information NTG0867512

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP28_RS05635
• Genome accession: NZ_CP148193
• Coordinates: 1087401..1088360 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain Z1323CCJ0075
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1082401..1093360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP28_RS05610 (WHP28_05610)	neuC	1082966..1084081 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
WHP28_RS05615 (WHP28_05615)	-	1084078..1084992 (+)	915	Protein_1085	beta-1,4-N-acetylgalactosaminyltransferase	-
WHP28_RS05620 (WHP28_05620)	-	1085026..1085688 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WHP28_RS05625 (WHP28_05625)	-	1085683..1086534 (-)	852	WP_014516804.1	glycosyltransferase	-
WHP28_RS05630 (WHP28_05630)	waaV	1086518..1087342 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WHP28_RS05635 (WHP28_05635)	waaF	1087401..1088360 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP28_RS05640 (WHP28_05640)	gmhA	1088341..1088901 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WHP28_RS05645 (WHP28_05645)	rfaE1	1088898..1090283 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP28_RS05650 (WHP28_05650)	rfaD	1090276..1091229 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP28_RS05655 (WHP28_05655)	gmhB	1091230..1091790 (-)	561	WP_052782596.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP28_RS05660 (WHP28_05660)	-	1091871..1092173 (+)	303	WP_002852762.1	cytochrome c	-
WHP28_RS05665 (WHP28_05665)	ccoS	1092196..1092402 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=867512 WHP28_RS05635 WP_002875425.1 1087401..1088360(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0075]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=867512 WHP28_RS05635 WP_002875425.1 1087401..1088360(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0075]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1