Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   Q7620_RS06460 Genome accession   NZ_CP131713
Coordinates   1278111..1278848 (-) Length   245 a.a.
NCBI ID   WP_341948084.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 2008C09-276     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1273111..1283848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7620_RS06440 (Q7620_06430) msrB 1274570..1275508 (-) 939 WP_000818207.1 peptide-methionine (R)-S-oxide reductase MsrB -
  Q7620_RS06445 (Q7620_06435) - 1275575..1275727 (-) 153 WP_224757156.1 chlorohydrolase -
  Q7620_RS06450 (Q7620_06440) thrB 1275803..1276672 (-) 870 WP_000692438.1 homoserine kinase -
  Q7620_RS06455 (Q7620_06445) - 1276674..1277960 (-) 1287 WP_024477991.1 homoserine dehydrogenase -
  Q7620_RS06460 (Q7620_06450) mecA 1278111..1278848 (-) 738 WP_341948084.1 adaptor protein MecA Regulator
  Q7620_RS06465 (Q7620_06455) - 1279048..1280082 (-) 1035 WP_000461498.1 hypothetical protein -
  Q7620_RS06470 (Q7620_06460) - 1280111..1281544 (-) 1434 WP_000565086.1 O-antigen polysaccharide polymerase Wzy family protein -
  Q7620_RS06475 (Q7620_06465) - 1281560..1282546 (-) 987 WP_000446981.1 glycosyltransferase family 2 protein -
  Q7620_RS06480 (Q7620_06470) - 1282548..1283651 (-) 1104 WP_000225905.1 glycosyltransferase -

Sequence

Protein


Download         Length: 245 a.a.        Molecular weight: 28409.24 Da        Isoelectric Point: 4.0199

>NTDB_id=864347 Q7620_RS06460 WP_341948084.1 1278111..1278848(-) (mecA) [Streptococcus pneumoniae strain 2008C09-276]
MKMKQISDTTLKITMSLEDLMDRGMEIADFLVPQEKTEEFFYAILDELEMPDSFLDTGMLSFRVTPKPDKVDVFVTKSKI
DQNLDFEDLSDLPDMEELAQMSPDEFIKTLEKSIADKTKDDIEAIQSLEQVEAKEEEQEQAEQEAESKKEPYIYYILSFA
KLADLVVFAKTVTFEMETSELYKMNERYYLTLLVDIENHPSPYPAWLLARMREFADDSDISRSVLQEYGQVLMSHDAVLN
LQKIG

Nucleotide


Download         Length: 738 bp        

>NTDB_id=864347 Q7620_RS06460 WP_341948084.1 1278111..1278848(-) (mecA) [Streptococcus pneumoniae strain 2008C09-276]
ATGAAAATGAAACAAATTAGTGATACAACTTTAAAAATCACGATGTCTTTAGAGGATTTGATGGATCGTGGAATGGAGAT
TGCTGACTTTCTCGTTCCTCAAGAAAAAACAGAAGAGTTCTTTTATGCTATCTTGGATGAGCTAGAGATGCCTGATAGCT
TTCTGGATACAGGCATGTTGAGCTTCCGTGTGACTCCAAAACCTGATAAGGTAGATGTCTTTGTGACCAAGTCAAAGATT
GACCAAAATCTAGATTTTGAAGACTTATCGGATTTGCCAGATATGGAAGAATTGGCTCAAATGTCTCCAGATGAATTTAT
CAAAACCCTGGAAAAAAGCATCGCAGACAAAACCAAGGATGATATCGAAGCCATTCAATCTCTTGAGCAAGTTGAAGCCA
AGGAAGAAGAGCAAGAGCAGGCTGAACAAGAAGCTGAGAGTAAGAAAGAACCTTACATCTACTACATCCTTTCTTTTGCT
AAGTTGGCTGACTTGGTAGTTTTTGCCAAGACAGTGACTTTTGAAATGGAAACTTCTGAACTCTACAAAATGAACGAGCG
CTATTATTTGACCCTTTTAGTGGATATTGAAAATCATCCAAGCCCATATCCAGCTTGGCTGTTGGCCCGTATGCGCGAGT
TTGCAGACGATAGTGATATCAGTCGCTCAGTCTTACAAGAGTATGGTCAAGTCTTGATGAGTCACGATGCAGTGCTCAAT
CTGCAAAAAATCGGCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-239)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

98.776

100

0.988
  mecA Streptococcus pneumoniae D39

98.776

100

0.988
  mecA Streptococcus pneumoniae R6

98.776

100

0.988
  mecA Streptococcus pneumoniae TIGR4

98.367

100

0.984
  mecA Streptococcus thermophilus LMD-9

47.39

100

0.482
  mecA Streptococcus mutans UA159

48.163

100

0.482
  mecA Streptococcus thermophilus LMG 18311

46.988

100

0.478