Detailed information NTG0861125

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: Q5R05_RS09050
• Genome accession: NZ_CP130703
• Coordinates: 1764891..1767044 (-)
• Length: 717 a.a.
• NCBI ID: WP_135197922.1
• Uniprot ID: -
• Organism: Leuconostoc carnosum strain AMS1
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1759891..1772044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q5R05_RS09015 (Q5R05_09015)	-	1760295..1760750 (+)	456	Protein_1724	nucleoside hydrolase	-
Q5R05_RS09020 (Q5R05_09020)	-	1760910..1761365 (-)	456	WP_305068454.1	CPBP family intramembrane glutamic endopeptidase	-
Q5R05_RS09025 (Q5R05_09025)	-	1761355..1761564 (-)	210	WP_305068455.1	hypothetical protein	-
Q5R05_RS09035 (Q5R05_09035)	-	1762948..1763073 (-)	126	WP_263317194.1	hypothetical protein	-
Q5R05_RS09040 (Q5R05_09040)	-	1763249..1763509 (-)	261	WP_135197920.1	helix-turn-helix domain-containing protein	-
Q5R05_RS09045 (Q5R05_09045)	-	1763502..1764878 (-)	1377	WP_135197921.1	bacteriocin secretion accessory protein	-
Q5R05_RS09050 (Q5R05_09050)	comA	1764891..1767044 (-)	2154	WP_135197922.1	peptide cleavage/export ABC transporter	Regulator
Q5R05_RS09055 (Q5R05_09055)	-	1767459..1767605 (-)	147	WP_172600989.1	hypothetical protein	-
Q5R05_RS09060 (Q5R05_09060)	-	1767647..1767811 (-)	165	WP_172600990.1	hypothetical protein	-
Q5R05_RS09065 (Q5R05_09065)	-	1768004..1768783 (+)	780	WP_172600991.1	CPBP family intramembrane glutamic endopeptidase	-
Q5R05_RS09070 (Q5R05_09070)	-	1768843..1768977 (+)	135	WP_263317040.1	hypothetical protein	-
Q5R05_RS09075 (Q5R05_09075)	-	1769131..1770030 (-)	900	WP_135197923.1	PhzF family isomerase	-
Q5R05_RS09080 (Q5R05_09080)	-	1770179..1770316 (-)	138	WP_172600992.1	hypothetical protein	-
Q5R05_RS09085 (Q5R05_09085)	-	1770346..1770875 (+)	530	Protein_1738	recombinase family protein	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 79428.33 Da
• Isoelectric Point: 5.2069

>NTDB_id=861125 Q5R05_RS09050 WP_135197922.1 1764891..1767044(-) (comA) [Leuconostoc carnosum strain AMS1]
MFIKKINYIPQVDERDCGVAAVAMIMAHYSTRMSLARLREIAKTDMEGTTALGIVKAAQALDFDTMPVQADLSMFDKKDL
PYPFIAHVQKDGKYPHYYVVYGMKGKNLLIADPDITVGRTKMAKSYFANEWTGVAIFIAPNPTYKPTKDKKRSLSSFIPV
IVKQRGLVTNIVIAALMVTLVSILGSYYLQGIIDTYIPDNMKSTLGVVSVGLIVAYVIQQMLSYARDYLLIIMGQRLSID
IILSYIKHIFELPMSFFATRRTGEIISRFTDANAIIEALASTMLSLFLDVGILVIVGTVLVIQNPTLFLISLVAVPAYSL
VIWLFMKPFSKMNNDQMQAGAMLSASIIEDINGVETIKALNSEQVAYKKVDHEFVTYLDKSFIYAKTEAVQNALKSLLHL
ILNVLVLWVGSQLVMDNKISMGQLITYNALLGFFTDPLQNIINLQTKLQQASVANNRLNEVYLVESEYKEQSALSEEIAD
ASDINMTQVTYKYGFGAPAIDDVSLQIESGEKVALVGVSGSGKSTLVKLLVNFFQPESGTIMIGNSTLENIDKHELRSYI
NYLPQEPYIFTGSIIENLMLGANPGTTQADIIRATELAEIKDDIENMSQGFSTELAESGNISGGQKQRIALARALLVDSP
VLILDESTSNLDVLTEKKIIDNLMKLTDKTIIFVAHRLTVSQKVQRIIAMQSGKIIEDGSHDELLEQAGFYASLFND

Nucleotide

• Length: 2154 bp

>NTDB_id=861125 Q5R05_RS09050 WP_135197922.1 1764891..1767044(-) (comA) [Leuconostoc carnosum strain AMS1]
ATGTTTATCAAAAAAATTAATTACATACCGCAAGTTGATGAACGTGATTGTGGGGTGGCAGCGGTAGCCATGATTATGGC
GCATTATAGTACACGAATGTCCTTAGCACGATTACGTGAAATAGCCAAGACAGACATGGAGGGAACGACAGCATTAGGAA
TTGTTAAGGCAGCACAAGCGCTTGATTTCGATACAATGCCAGTTCAGGCAGATCTATCTATGTTTGATAAGAAAGACTTA
CCTTATCCATTTATTGCACATGTTCAAAAAGATGGCAAGTATCCACATTATTACGTTGTTTATGGTATGAAGGGGAAAAA
TCTATTAATTGCTGATCCTGATATTACCGTTGGTAGGACTAAAATGGCAAAATCTTATTTTGCTAATGAATGGACTGGTG
TCGCCATATTTATTGCTCCCAATCCAACTTATAAACCAACCAAAGATAAGAAACGCTCGTTAAGCTCTTTTATACCGGTT
ATCGTTAAGCAACGTGGATTGGTGACTAATATTGTAATCGCGGCACTTATGGTGACTTTGGTCAGTATTTTAGGATCTTA
TTATTTGCAGGGAATTATTGATACCTATATACCAGATAATATGAAGAGCACGCTGGGTGTTGTATCTGTCGGTTTAATTG
TAGCCTATGTGATACAGCAGATGTTGTCATATGCCAGAGATTACTTATTAATTATCATGGGTCAACGATTATCAATTGAT
ATTATTCTGTCCTATATTAAGCATATTTTTGAATTACCGATGTCTTTTTTTGCAACAAGACGGACCGGAGAAATTATTAG
CCGTTTCACTGATGCGAATGCTATTATTGAAGCCTTGGCTAGTACAATGTTGTCCTTGTTTTTAGATGTTGGCATATTAG
TTATAGTTGGAACAGTATTAGTGATTCAAAATCCAACGTTATTTTTGATTTCATTAGTAGCAGTACCAGCATATTCTTTA
GTGATATGGCTCTTTATGAAGCCGTTTTCTAAGATGAATAATGATCAAATGCAAGCTGGGGCAATGTTGAGCGCTTCAAT
CATAGAAGACATTAATGGTGTCGAAACGATTAAAGCATTGAACAGTGAACAAGTTGCGTATAAAAAAGTTGATCATGAAT
TTGTCACGTATTTAGATAAGTCATTTATCTATGCCAAAACTGAAGCGGTTCAAAATGCACTTAAGAGTTTATTGCACTTA
ATTTTGAATGTTTTAGTTCTTTGGGTTGGCTCACAATTGGTTATGGATAACAAAATAAGCATGGGTCAGCTGATCACATA
TAATGCTCTACTTGGATTTTTTACAGATCCATTACAAAACATTATCAACTTACAAACTAAGTTGCAACAAGCTTCAGTTG
CTAATAATCGCTTAAATGAAGTGTACTTAGTTGAGTCAGAATATAAAGAACAGTCCGCATTAAGTGAAGAAATCGCAGAT
GCTAGTGATATCAATATGACACAGGTGACTTATAAATACGGCTTTGGTGCACCTGCGATTGATGATGTGTCACTTCAAAT
TGAATCAGGTGAAAAAGTTGCCTTGGTTGGTGTGAGCGGTTCGGGGAAATCAACATTAGTGAAATTGTTAGTTAATTTTT
TCCAGCCGGAATCAGGCACAATCATGATAGGGAATAGTACATTAGAAAATATTGATAAACATGAATTACGCTCGTATATT
AATTACCTCCCACAAGAGCCGTATATTTTTACAGGTTCAATTATTGAAAATTTGATGTTAGGTGCAAATCCTGGAACAAC
ACAAGCGGATATTATACGCGCGACTGAATTAGCTGAAATTAAAGACGATATTGAAAACATGTCACAAGGATTTAGTACAG
AATTAGCTGAGAGTGGGAATATTTCAGGTGGTCAAAAACAGCGGATTGCTTTAGCACGCGCTCTGCTGGTTGATTCACCC
GTCTTAATTCTTGATGAATCGACTAGTAATTTAGATGTATTAACTGAAAAGAAGATTATTGATAATTTAATGAAGTTAAC
TGATAAAACGATTATTTTTGTGGCGCATCGTCTGACCGTATCACAAAAAGTACAGCGCATTATTGCTATGCAATCAGGTA
AAATAATTGAAGACGGGTCTCATGATGAATTACTAGAACAAGCGGGCTTCTATGCCTCTTTGTTTAATGATTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-438)

• ABC transporter (ABC_tran) (501-649)

• Peptidase C39 family (Peptidase_C39) (6-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	60.251	100	0.603
comA	Streptococcus gordonii str. Challis substr. CH1	59.972	100	0.6
comA	Streptococcus mitis SK321	59.833	100	0.598
comA	Streptococcus pneumoniae Rx1	59.414	100	0.594
comA	Streptococcus pneumoniae D39	59.414	100	0.594
comA	Streptococcus pneumoniae R6	59.414	100	0.594
comA	Streptococcus pneumoniae TIGR4	59.275	100	0.593
comA/nlmT	Streptococcus mutans UA159	58.333	98.745	0.576