Detailed information NTG0857868

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: Q3F87_RS02060
• Genome accession: NZ_CP130328
• Coordinates: 257465..258952 (-)
• Length: 495 a.a.
• NCBI ID: WP_302700289.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain TB2-2B
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 252465..263952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3F87_RS02035 (Q3F87_02035)	-	252805..253191 (-)	387	WP_034703874.1	hypothetical protein	-
Q3F87_RS02040 (Q3F87_02040)	-	253292..253690 (+)	399	WP_166136510.1	MAPEG family protein	-
Q3F87_RS02045 (Q3F87_02045)	ppa	253811..254347 (+)	537	WP_005233448.1	inorganic diphosphatase	-
Q3F87_RS02050 (Q3F87_02050)	-	254449..255801 (-)	1353	WP_302700285.1	OprD family outer membrane porin	-
Q3F87_RS02055 (Q3F87_02055)	-	256670..257398 (+)	729	WP_302700287.1	TorF family putative porin	-
Q3F87_RS02060 (Q3F87_02060)	comM	257465..258952 (-)	1488	WP_302700289.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
Q3F87_RS02065 (Q3F87_02065)	-	259018..259245 (-)	228	WP_159123951.1	accessory factor UbiK family protein	-
Q3F87_RS02070 (Q3F87_02070)	glnK	259524..259862 (+)	339	WP_004650081.1	P-II family nitrogen regulator	-
Q3F87_RS02075 (Q3F87_02075)	-	259924..261339 (+)	1416	WP_166136495.1	ammonium transporter	-
Q3F87_RS02080 (Q3F87_02080)	nrdR	261479..261946 (+)	468	WP_004787309.1	transcriptional regulator NrdR	-
Q3F87_RS02085 (Q3F87_02085)	ribD	261949..263037 (+)	1089	WP_076754588.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 54241.14 Da
• Isoelectric Point: 7.2016

>NTDB_id=857868 Q3F87_RS02060 WP_302700289.1 257465..258952(-) (comM) [Acinetobacter variabilis strain TB2-2B]
MSFAKIYTRGLLGLHAPLIEVEVHVSSGMPSLTIVGLPEAAVRESKDRVRSAILNSGFQFPTKRLTINLAPADLPKDGSR
LDLPIALGILVASGQLPENCTDDLEFIGELALDGQLRPVTGILSIAIACQQAQHQLILPSPNAQEASQLPDFQVFAANHL
QEVCAHLAQAETLPPFKTSPLDQHSFYKFDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLASILPPLNT
QENLEVASIYSIANANHPFGQRPFRAPHHTASAIALVGGGSHPKPGEITLAHLGVLFLDELPEFDRKVLEVLRQPLESKE
IVISRASRQITFPANFQLVAAMNPCPCGYAFNQDSRCQCSPESIKRYQNRISGPLLDRIDLHIDVPPLQAQELQDNKPVE
NSETVRQRVISAYNIQIERQNALNMSLSPKQLEQYAPLDPPAQKMIELAQQKLNLSARGYHRILRVARTIADLNQSPDIQ
TGHLSEALSYRGQHI

Nucleotide

• Length: 1488 bp

>NTDB_id=857868 Q3F87_RS02060 WP_302700289.1 257465..258952(-) (comM) [Acinetobacter variabilis strain TB2-2B]
ATGTCTTTTGCCAAAATTTATACGCGAGGCCTGTTAGGCCTGCATGCACCTTTAATTGAAGTCGAAGTTCATGTCAGTTC
TGGCATGCCTTCCCTCACCATTGTGGGGCTTCCTGAAGCCGCAGTCAGGGAAAGTAAGGATCGGGTTCGATCAGCTATTC
TGAATAGCGGCTTTCAGTTTCCGACCAAACGCCTGACCATTAATCTGGCACCTGCCGATCTACCTAAAGATGGCTCACGT
TTGGACTTGCCGATTGCGCTAGGAATTTTAGTGGCCTCAGGGCAGCTTCCAGAAAATTGCACAGATGACCTTGAATTTAT
TGGTGAACTGGCCCTAGATGGTCAATTGCGGCCAGTAACAGGAATCCTGAGTATTGCAATCGCCTGCCAGCAGGCACAGC
ATCAACTGATCTTGCCTAGTCCGAATGCTCAGGAAGCCTCTCAACTTCCGGATTTTCAGGTATTTGCTGCCAATCATTTA
CAGGAAGTCTGTGCACATCTGGCTCAAGCAGAAACCTTGCCCCCGTTTAAGACCAGTCCATTAGATCAGCACTCTTTTTA
TAAATTTGATCTTGCGGATGTGAAAGGACAATTGCGACCACGACGTGCCTTGGAAATTGCAGCTGCAGGTGGCCATTCCC
TGCTGTTCCGCGGCCCACCTGGTACAGGTAAAACCTTATTAGCATCGCGCCTCGCCAGTATTTTACCTCCCTTAAATACT
CAGGAAAATCTGGAAGTTGCTAGTATCTATTCAATTGCCAATGCCAATCATCCCTTTGGCCAGCGGCCATTTCGGGCACC
GCATCATACTGCGTCTGCCATTGCACTGGTCGGCGGTGGCTCACATCCTAAACCTGGAGAGATCACACTGGCACATTTGG
GCGTTTTATTTCTAGACGAACTGCCTGAGTTTGACCGCAAGGTTTTAGAAGTATTACGTCAGCCGCTTGAGTCCAAAGAA
ATTGTAATCTCACGTGCTTCCCGGCAAATTACTTTTCCAGCCAACTTTCAGTTGGTGGCAGCCATGAATCCTTGTCCATG
CGGTTATGCATTTAATCAGGACAGCCGCTGTCAATGTTCACCTGAAAGCATAAAGCGTTATCAGAACCGGATTTCTGGTC
CATTACTGGACCGGATTGACCTGCATATTGACGTACCACCTTTACAGGCACAGGAGTTACAGGACAATAAACCTGTCGAA
AACTCTGAAACGGTCAGACAGCGTGTGATCAGCGCCTATAATATTCAGATCGAACGGCAAAATGCCTTGAACATGAGTCT
TAGTCCAAAGCAACTAGAACAATACGCCCCTCTCGATCCACCAGCTCAGAAAATGATTGAACTGGCTCAGCAGAAACTGA
ATTTGTCAGCACGAGGCTATCATCGGATTTTGCGTGTTGCCCGAACCATTGCCGATCTTAACCAAAGTCCAGATATTCAG
ACTGGGCACTTATCGGAAGCCTTGTCTTATCGCGGGCAGCACATTTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-491)

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	52.121	100	0.521
comM	Haemophilus influenzae Rd KW20	51.703	100	0.521
comM	Legionella pneumophila str. Paris	51.008	100	0.511
comM	Legionella pneumophila strain ERS1305867	51.008	100	0.511
comM	Glaesserella parasuis strain SC1401	50.701	100	0.511
comM	Vibrio campbellii strain DS40M4	50.505	100	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.813	100	0.475