Detailed information NTG0085785

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: I0P84_RS01030
• Genome accession: NZ_AP024524
• Coordinates: 227489..228628 (-)
• Length: 379 a.a.
• NCBI ID: WP_175966351.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain RYU24
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 222489..233628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I0P84_RS01000 (RYU24_02000)	-	222757..223362 (-)	606	WP_214001831.1	hypothetical protein	-
I0P84_RS01005 (RYU24_02010)	-	223527..223904 (-)	378	WP_214001832.1	RcnB family protein	-
I0P84_RS01010 (RYU24_02020)	-	224113..224658 (-)	546	WP_214001833.1	glutathione peroxidase	-
I0P84_RS01015 (RYU24_02030)	-	224833..225378 (-)	546	WP_104426931.1	glutathione peroxidase	-
I0P84_RS01020 (RYU24_02040)	-	225570..226481 (+)	912	WP_104426932.1	DMT family transporter	-
I0P84_RS01025 (RYU24_02050)	-	226879..227448 (-)	570	WP_034171542.1	L-threonylcarbamoyladenylate synthase	-
I0P84_RS01030 (RYU24_02060)	dprA	227489..228628 (-)	1140	WP_175966351.1	DNA-processing protein DprA	Machinery gene
I0P84_RS01035 (RYU24_02070)	tsaP	228686..229840 (-)	1155	WP_104426934.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
I0P84_RS01040 (RYU24_02080)	def	229961..230491 (+)	531	WP_004780730.1	peptide deformylase	-
I0P84_RS01045 (RYU24_02090)	-	230584..230994 (+)	411	WP_104426935.1	DUF2946 family protein	-
I0P84_RS01050 (RYU24_02100)	-	231066..233132 (+)	2067	WP_214001834.1	TonB-dependent copper receptor	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 42727.54 Da
• Isoelectric Point: 6.8113

>NTDB_id=85785 I0P84_RS01030 WP_175966351.1 227489..228628(-) (dprA) [Acinetobacter variabilis strain RYU24]
MLNSLSRVQLETLTLWYLVQHSLSSFYKISQHYSSLTTAIQPDQVPTWQALGIHANHVQRLKDFSLPESQQKFQRCLEKV
QRDSDFVLLYHDLHYPQQLSHYVDKPPIIFGQGQPDTLLQAQIAVVGSRKPSPHGRQVAYDFSFYLSEQGFYINSGLAQG
IDEAAHRAGLKHQGTIAVMGTGLDQTYPSQHAQLRQEIIAHGGAVITEFLPETPPLQHHFPRRNRIVSGLSLGVIVAEAT
LKSGSLITAKLAAEQGKTVFAIPGHIYSEYHKGCHQLIREGAILIDHPQQVIEELALATQWQALQNEVQHDMADELPTHI
PPHLLRLYNQLDWVGQDLDHLSHHLQQDVSSLTGQLMELELLGFCTQQAGMYLRCRPHK

Nucleotide

• Length: 1140 bp

>NTDB_id=85785 I0P84_RS01030 WP_175966351.1 227489..228628(-) (dprA) [Acinetobacter variabilis strain RYU24]
ATGCTGAACTCTTTATCACGCGTGCAACTGGAAACACTGACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGCTTCTA
TAAAATCAGTCAGCATTATTCAAGTCTGACCACAGCCATACAGCCTGATCAGGTGCCTACCTGGCAGGCGCTTGGCATTC
ATGCCAATCATGTCCAACGCTTAAAAGACTTCTCGCTTCCAGAATCACAACAGAAATTTCAGCGCTGTCTGGAAAAAGTT
CAGCGAGATAGTGATTTTGTTCTACTCTACCATGATCTGCACTATCCGCAGCAACTCAGCCACTATGTAGACAAACCACC
GATTATTTTTGGCCAAGGTCAGCCGGATACCCTGCTACAAGCCCAAATTGCAGTTGTGGGAAGTCGCAAGCCGAGTCCTC
ATGGCCGGCAAGTAGCTTATGATTTTTCCTTTTATTTGAGTGAACAGGGTTTCTATATTAATAGTGGATTAGCACAAGGC
ATAGATGAAGCTGCTCATCGGGCAGGATTAAAACATCAGGGAACCATTGCGGTGATGGGAACCGGACTGGATCAGACCTA
CCCTTCTCAACATGCACAATTGCGCCAGGAGATTATTGCGCATGGTGGTGCCGTCATTACCGAGTTTCTACCGGAAACCC
CACCGTTGCAGCATCACTTTCCACGGCGTAACAGGATTGTCAGTGGCTTAAGTCTCGGGGTCATTGTGGCTGAAGCGACC
TTAAAAAGCGGCTCTCTGATTACGGCCAAACTGGCTGCCGAACAAGGCAAGACTGTATTTGCCATTCCGGGACATATTTA
TAGTGAATATCATAAAGGTTGCCATCAGCTGATTCGTGAAGGCGCGATTCTGATTGATCACCCGCAACAGGTGATTGAAG
AACTGGCTCTGGCAACCCAATGGCAAGCCTTACAAAATGAAGTACAACATGACATGGCGGATGAACTTCCTACACACATA
CCGCCCCATTTGCTCAGACTTTATAACCAGCTGGACTGGGTCGGACAGGATCTGGATCATCTCAGTCATCATCTGCAACA
GGATGTTTCTTCTCTCACCGGTCAATTGATGGAACTGGAGCTACTTGGCTTTTGCACCCAGCAAGCCGGCATGTATCTAC
GTTGTCGTCCGCATAAATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (326-371)

• DNA recombination-mediator protein A (DNA_processg_A) (86-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Acinetobacter baumannii strain A118	63.298	99.208	0.628
dprA	Acinetobacter baumannii D1279779	62.5	99.208	0.62
dprA	Acinetobacter baylyi ADP1	59.474	100	0.596
dprA	Vibrio cholerae strain A1552	40.533	89.182	0.361