Detailed information NTG0856129

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: QZH48_RS08895
• Genome accession: NZ_CP129879
• Coordinates: 1887105..1889315 (-)
• Length: 736 a.a.
• NCBI ID: WP_301675623.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain CAB701
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1882105..1894315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZH48_RS08865 (QZH48_08865)	atpA	1882149..1883651 (-)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-
QZH48_RS08870 (QZH48_08870)	-	1883838..1884365 (-)	528	WP_029344288.1	F0F1 ATP synthase subunit delta	-
QZH48_RS08875 (QZH48_08875)	atpF	1884367..1884873 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
QZH48_RS08880 (QZH48_08880)	atpB	1884888..1885601 (-)	714	WP_038601808.1	F0F1 ATP synthase subunit A	-
QZH48_RS08885 (QZH48_08885)	-	1885646..1885861 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
QZH48_RS08890 (QZH48_08890)	-	1886045..1886821 (-)	777	WP_029344289.1	alpha/beta hydrolase family protein	-
QZH48_RS08895 (QZH48_08895)	comEC	1887105..1889315 (-)	2211	WP_301675623.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QZH48_RS08900 (QZH48_08900)	comEA	1889296..1889943 (-)	648	WP_269887770.1	ComEA family DNA-binding protein	Machinery gene
QZH48_RS08905 (QZH48_08905)	-	1890003..1891364 (-)	1362	WP_269887769.1	ABC transporter permease	-
QZH48_RS08910 (QZH48_08910)	-	1891361..1892293 (-)	933	WP_256294267.1	ABC transporter ATP-binding protein	-
QZH48_RS08915 (QZH48_08915)	-	1892397..1892795 (-)	399	WP_195927619.1	hypothetical protein	-
QZH48_RS08920 (QZH48_08920)	-	1892899..1893462 (-)	564	WP_098393297.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84691.48 Da
• Isoelectric Point: 9.7558

>NTDB_id=856129 QZH48_RS08895 WP_301675623.1 1887105..1889315(-) (comEC) [Lactococcus lactis subsp. lactis strain CAB701]
MSYVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLALYRKYYLVIPLLLVMRSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFLGKERGQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLESQNI
YRQIMIDKTNKIVLNDTFDLHVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQMGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRQNPLDNLAVTTLLLMIVSPKFLLTTGGQLT
LFYAFVISMISHKFSELKGIRKLLTESSVISLSVLPLLILDFHIFQPFSIFLTIGFGFLFDVILLPLLLGTFLLSLIGYS
FNINLIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVQKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNPDFIKEINPKLALISVGKENRYGHPNQETLETLKKYQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=856129 QZH48_RS08895 WP_301675623.1 1887105..1889315(-) (comEC) [Lactococcus lactis subsp. lactis strain CAB701]
ATGAGTTATGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATCTTTCTGTTATATTGTATTTTTTAATTTTTAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTTATATAGAAAATATTATTTAGTCATCCCACTTT
TATTAGTTATGAGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAACAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACGATCCAAGTTAATGGTGATTTATTAAGTTTTCTAGGAAAAGAAAGAGGACAAAATTA
TCAAGTTTACGAGACTCTAAAAAGCAAAAAAGAACAGAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAACCAAAAGTATTTAGAGAGCCAGAATATT
TATCGGCAAATTATGATTGATAAAACTAATAAAATAGTTTTAAATGACACTTTTGACCTCCATGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGACTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATGGGAGACATTTATAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATCTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCAAAATCCTT
TAGATAATCTAGCGGTGACAACCCTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTCACT
TTATTTTATGCTTTTGTTATTTCAATGATTAGTCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATTTTTCAACCTTTTTCAATTTTTCTGACGA
TTGGCTTTGGATTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAGT
TTTAATATAAATCTTATTTTTCAAATTCTTGAATGGCTAATTCATGAGGTTGATTTACCCTTGCATTATCCTTTGGTTTT
AGGGAATCCCAGGCCAATTGAATTATTAATCTTATTTTTCCTAATTGGTTTGTTAATTGATAATCTTTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGGGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAATTGACAAATAATCATTTTGTACAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACCCTGACTTTATTAAAGAAATTAATCCCAAACTTGCTCTCATTTCGGTTGGCAAGGAAAATCGAT
ATGGACATCCCAACCAAGAAACTCTAGAAACATTAAAAAAATACCAAATCAGAATACTTAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (206-446)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.766	100	0.768
comEC/celB	Streptococcus mitis SK321	44.879	100	0.452
comEC/celB	Streptococcus mitis NCTC 12261	44.609	100	0.45
comEC/celB	Streptococcus pneumoniae TIGR4	44.011	100	0.444
comEC/celB	Streptococcus pneumoniae Rx1	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae D39	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae R6	43.607	100	0.44