Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | R2TS_RS01560 | Genome accession | NZ_AP024498 |
| Coordinates | 337238..337768 (+) | Length | 176 a.a. |
| NCBI ID | WP_029740211.1 | Uniprot ID | A0A263VT06 |
| Organism | Enterobacter asburiae strain En30 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 332238..342768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2TS_RS01540 (R2TS_03000) | aphA | 332562..333275 (+) | 714 | WP_182072276.1 | acid phosphatase AphA | - |
| R2TS_RS01545 (R2TS_03010) | - | 333389..333805 (+) | 417 | WP_023310052.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| R2TS_RS01550 (R2TS_03020) | - | 333808..334161 (+) | 354 | WP_023310053.1 | MmcQ/YjbR family DNA-binding protein | - |
| R2TS_RS01555 (R2TS_03030) | uvrA | 334165..336987 (-) | 2823 | WP_087823799.1 | excinuclease ABC subunit UvrA | - |
| R2TS_RS01560 (R2TS_03040) | ssb | 337238..337768 (+) | 531 | WP_029740211.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| R2TS_RS01565 (R2TS_03050) | - | 337831..338112 (-) | 282 | WP_207167914.1 | YjcB family protein | - |
| R2TS_RS01570 (R2TS_03060) | - | 338758..340323 (+) | 1566 | WP_029740210.1 | EAL domain-containing protein | - |
| R2TS_RS01575 (R2TS_03070) | soxS | 340330..340656 (-) | 327 | WP_013095071.1 | superoxide response transcriptional regulator SoxS | - |
| R2TS_RS01580 (R2TS_03080) | soxR | 340755..341213 (+) | 459 | WP_023331806.1 | redox-sensitive transcriptional activator SoxR | - |
| R2TS_RS01585 (R2TS_03090) | - | 341506..342177 (+) | 672 | WP_039264123.1 | glutathione S-transferase family protein | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18792.81 Da Isoelectric Point: 5.2456
>NTDB_id=85375 R2TS_RS01560 WP_029740211.1 337238..337768(+) (ssb) [Enterobacter asburiae strain En30]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQSQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=85375 R2TS_RS01560 WP_029740211.1 337238..337768(+) (ssb) [Enterobacter asburiae strain En30]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTAGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGTACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGTCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAGCCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGTGTAGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGGCCGGCGCTGAGAAGTACACCACAGAAGTCGTGGTCAACGTGGG
CGGTACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGTCAGAGCCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCTCCG
GCGCCGTCTAACGAGCCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.773 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |