Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U66_RS07830 Genome accession   NZ_CP145864
Coordinates   1691701..1693488 (-) Length   595 a.a.
NCBI ID   WP_045771919.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1686701..1698488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS07800 (V6U66_07790) - 1686803..1687573 (-) 771 Protein_1485 nucleoside phosphorylase -
  V6U66_RS07805 (V6U66_07795) - 1687652..1688146 (-) 495 WP_045771915.1 DUF6773 family protein -
  V6U66_RS07810 (V6U66_07800) - 1688160..1688357 (-) 198 WP_045772022.1 helix-turn-helix transcriptional regulator -
  V6U66_RS07815 (V6U66_07805) - 1688535..1689518 (-) 984 WP_045771916.1 rhodanese-related sulfurtransferase -
  V6U66_RS07820 (V6U66_07810) - 1689709..1690410 (-) 702 WP_045771917.1 glucosamine-6-phosphate deaminase -
  V6U66_RS07825 (V6U66_07815) queA 1690561..1691604 (+) 1044 WP_045771918.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U66_RS07830 (V6U66_07820) rcrQ 1691701..1693488 (-) 1788 WP_045771919.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS07835 (V6U66_07825) rcrP 1693501..1695237 (-) 1737 WP_073689834.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS07840 (V6U66_07830) - 1695423..1695590 (-) 168 Protein_1493 LysR family transcriptional regulator -
  V6U66_RS07845 (V6U66_07835) - 1695600..1697153 (-) 1554 WP_037605638.1 BCCT family transporter -
  V6U66_RS07850 (V6U66_07840) - 1697270..1697392 (-) 123 WP_002269975.1 hypothetical protein -
  V6U66_RS07855 (V6U66_07845) rplL 1697601..1697969 (-) 369 WP_049529399.1 50S ribosomal protein L7/L12 -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66427.48 Da        Isoelectric Point: 5.2446

>NTDB_id=853633 V6U66_RS07830 WP_045771919.1 1691701..1693488(-) (rcrQ) [Streptococcus salivarius strain KSS7]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARYIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKIFGREDKSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGHLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853633 V6U66_RS07830 WP_045771919.1 1691701..1693488(-) (rcrQ) [Streptococcus salivarius strain KSS7]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCCTGAAAATTGTTAGTGTCATCATGAGTGTCCTTGAACCCGTAGTCATTGGTTTAGCTATTA
CCGAGTTGACTAAAAATACGCTGGCCATCATCAAAGGTGTGGAAGGTGCTCATATCAACGTCTCCTATGTTGGTTTGGTT
CTCGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCCGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGTGACCTCTTGGGACGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTACTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACATTCTTTGGTGCCCGCTATATCATGAGTAAGTCTCAGCCCTACTTTAAACAGCAGGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGATTTTTGGGCGTGAGGATAAATCCTTG
GATGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCTAATTTCATTTCAGGACTTATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTCATTGTTGCTGTTCTAGGTGGTTTGCAAGTCTTGGCTGGTCACTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGGCAA
TTGCAGAGTGCTAAATCCTCTTTAGACCGTATTTTCCAACTCATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTAGAGGGAGATTTGACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCCATTGTCGGTCCTACCGGTGCCGGAAAATCAACGATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCCGGGTCTATCTCGGTTGACGGTCATGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAGCAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCCGCTAAGGCAGCCAATGTGGACCATTTTATCCGTACACTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCGGTTGATACCCGTCTGGAACTCCTGATTCAAAAAG
CCATGAAGACCCTTATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGTCTGTCAACTATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGAAACCATGAATCCCTCCTTGCAGACAAAGGTTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.379

100

0.425