Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | QYQ96_RS01305 | Genome accession | NZ_CP129421 |
| Coordinates | 274873..275463 (+) | Length | 196 a.a. |
| NCBI ID | WP_000135851.1 | Uniprot ID | A0A067BH58 |
| Organism | Vibrio metoecus strain ZF102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 269873..280463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QYQ96_RS01290 (QYQ96_01290) | - | 270677..273154 (-) | 2478 | WP_055027426.1 | penicillin-binding protein 1A | - |
| QYQ96_RS01295 (QYQ96_01295) | pilM | 273296..274312 (+) | 1017 | WP_304572399.1 | type IV pilus assembly protein PilM | Machinery gene |
| QYQ96_RS01300 (QYQ96_01300) | pilN | 274302..274880 (+) | 579 | WP_258462896.1 | PilN domain-containing protein | Machinery gene |
| QYQ96_RS01305 (QYQ96_01305) | pilO | 274873..275463 (+) | 591 | WP_000135851.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| QYQ96_RS01310 (QYQ96_01310) | pilP | 275453..275971 (+) | 519 | WP_000794742.1 | pilus assembly protein PilP | Machinery gene |
| QYQ96_RS01315 (QYQ96_01315) | pilQ | 275997..277712 (+) | 1716 | WP_055029207.1 | type IV pilus secretin PilQ | Machinery gene |
| QYQ96_RS01320 (QYQ96_01320) | aroK | 277899..278423 (+) | 525 | WP_000818614.1 | shikimate kinase AroK | - |
| QYQ96_RS01325 (QYQ96_01325) | aroB | 278451..279536 (+) | 1086 | WP_000439816.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22853.18 Da Isoelectric Point: 4.3574
>NTDB_id=853134 QYQ96_RS01305 WP_000135851.1 274873..275463(+) (pilO) [Vibrio metoecus strain ZF102]
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=853134 QYQ96_RS01305 WP_000135851.1 274873..275463(+) (pilO) [Vibrio metoecus strain ZF102]
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGTTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCGAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGCTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTTGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGTTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCGAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGCTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTTGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
90.816 |
100 |
0.908 |
| pilO | Vibrio campbellii strain DS40M4 |
68.783 |
96.429 |
0.663 |