Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U62_RS01345 Genome accession   NZ_CP145860
Coordinates   242310..244658 (-) Length   782 a.a.
NCBI ID   WP_037611248.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 237310..249658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U62_RS01325 (V6U62_01320) lepB 239479..240129 (-) 651 WP_037611251.1 signal peptidase I -
  V6U62_RS01330 (V6U62_01325) rnhC 240148..241038 (-) 891 WP_037611250.1 ribonuclease HIII -
  V6U62_RS01335 (V6U62_01330) zapA 241355..241669 (+) 315 WP_004183554.1 cell division protein ZapA -
  V6U62_RS01340 (V6U62_01335) - 241666..242208 (+) 543 WP_002884677.1 CvpA family protein -
  V6U62_RS01345 (V6U62_01340) mutS/mutS2 242310..244658 (-) 2349 WP_037611248.1 endonuclease MutS2 Machinery gene
  V6U62_RS01350 (V6U62_01345) polA 244833..247472 (+) 2640 WP_349955160.1 DNA polymerase I -
  V6U62_RS01355 (V6U62_01350) - 248026..248427 (+) 402 WP_004183523.1 DUF6608 family protein -
  V6U62_RS01360 (V6U62_01355) - 248448..248708 (+) 261 WP_002884687.1 hypothetical protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87597.90 Da        Isoelectric Point: 6.4811

>NTDB_id=853136 V6U62_RS01345 WP_037611248.1 242310..244658(-) (mutS/mutS2) [Streptococcus salivarius strain KSS2]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853136 V6U62_RS01345 WP_037611248.1 242310..244658(-) (mutS/mutS2) [Streptococcus salivarius strain KSS2]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTACCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CTGAGATTTTCGTAGAACACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAACCCTTGCGTCGCTTGGAACTG
GATGCTGACCTCAACATTCAGGAGCTCATTGCCATCAAGAAGGTGCTACAAGCTTCAGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAAGATTGAGGCCTTCCCAAGTCTACAAGGTAGCC
TTCAAAGTATCAATGATGGTGGTTTTATTGAGCATTTTGCTAGCCCTGAGTTGCAGAATATCCGTCGTCAACTCAAATCT
TGCGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAAAAATCTGGCCACATGTTGGCTGAGAGTCTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CCGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAACTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CATGAGATGGCTCGTATCCTGCATGAATTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCAAGATAAGAAGGCGGTTATCCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCGCTCTTGGTCAATCCAGTGGCCAACGATTTGCGCTTTGATGAGGAC
CTCACAGCCATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTAGGATTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCCGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACTCACATTGTCGAGATTCTGGATGCTGCCGAC
AGCAACAGTCTTGTCTTGGTCGATGAGCTCGGGGCTGGTACTGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGCCAGATTAAAACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAGGGAGTTCCTGGT
CGCTCTAACGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAAATTATTGTCAAGGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAAAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAATGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGAAATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCTCAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTTGTTCGTGCCCAAGCGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AGAAAGCCAAAAAGGCATCTGGTGGTCCTCGTGCTCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCCGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.47

100

0.4